Analysis of interatomic Contacts of Structural Units in PDB entry:
9UOB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9UOB entry

There are 3 chains in PDB entry 9UOB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 30CYS 603
B
 ASN 31LEU 205
C
 PRO 1GLY 27
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 9UOB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
30 42Right-handed alpha
Helix 2
AA2
A
45 49Right-handed 310
Helix 3
AA3
A
87 92Right-handed 310
Helix 4
AA4
A
112 117Right-handed alpha
Helix 5
AA5
A
136 142Right-handed 310
Helix 6
AA6
A
160 166Right-handed 310
Helix 7
AA7
A
185 191Right-handed 310
Helix 8
AA8
A
211 215Right-handed 310
Helix 9
AA9
A
235 239Right-handed 310
Helix 10
AB1
A
284 289Right-handed 310
Helix 11
AB2
A
406 411Right-handed 310
Helix 12
AB3
A
498 504Right-handed 310
Helix 13
AB4
A
524 528Right-handed 310
Helix 14
AB5
A
546 551Right-handed 310
Helix 15
AB6
A
574 578Right-handed 310
Helix 16
AB7
B
32 43Right-handed alpha
Helix 17
AB8
B
60 64Right-handed 310
Helix 18
AB9
B
114 120Right-handed 310
Helix 19
AC1
B
162 168Right-handed 310
Helix 20
AC2
B
188 193Right-handed 310
Helix 21
AC3
B
195 199Right-handed 310
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There are 13 sheets in PDB entry 9UOB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 65first strand
Strand 2
A
71 75anti-parallel
Strand 3
A
97 99parallel
Strand 4
A
123 125parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
82 84first strand
Strand 2
A
104 108parallel
Strand 3
A
130 132parallel
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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
148 149first strand
Strand 2
A
172 173parallel
Strand 3
A
196 198parallel
Strand 4
A
220 221parallel
Strand 5
A
244 249parallel
Strand 6
A
270 275parallel
Strand 7
A
295 297parallel
Strand 8
A
319 321parallel
Strand 9
A
345 347parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
156 157first strand
Strand 2
A
178 179parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
229 230first strand
Strand 2
A
251 252parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
354 355first strand
Strand 2
A
376 377parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
369 371first strand
Strand 2
A
393 395parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
440 441first strand
Strand 2
A
461 462parallel
Strand 3
A
486 487parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
494 495first strand
Strand 2
A
516 519parallel
Strand 3
A
540 541parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
509 511first strand
Strand 2
A
533 535parallel
Strand 3
A
557 558parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
565 567first strand
Strand 2
A
586 589parallel
Strand 3
A
601 602parallel
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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
44 46first strand
Strand 2
B
85 87anti-parallel
Strand 3
B
108 111parallel
Strand 4
B
132 136parallel
Strand 5
B
156 158parallel
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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
67 69first strand
Strand 2
B
75 79anti-parallel
Strand 3
B
101 103parallel
Strand 4
B
125 127parallel
Strand 5
B
149 151parallel
Strand 6
B
173 175parallel
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