Analysis of interatomic Contacts of Structural Units in PDB entry:
9UOU

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9UOU entry

There are 2 chains in PDB entry 9UOU (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	LEU 3	ASN 624
A	LEU 3	ASN 624

There are 16 helices in PDB entry 9UOU. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	4	11	Right-handed alpha
Helix 2	AA2	B	97	103	Right-handed alpha
Helix 3	AA3	B	184	189	Right-handed alpha
Helix 4	AA4	B	270	275	Right-handed alpha
Helix 5	AA5	B	352	357	Right-handed alpha
Helix 6	AA6	B	445	453	Right-handed alpha
Helix 7	AA7	B	536	543	Right-handed alpha
Helix 8	AA8	A	8	12	Right-handed 310
Helix 9	AA9	A	97	103	Right-handed alpha
Helix 10	AB1	A	183	191	Right-handed alpha
Helix 11	AB2	A	270	276	Right-handed alpha
Helix 12	AB3	A	352	358	Right-handed alpha
Helix 13	AB4	A	359	361	Right-handed 310
Helix 14	AB5	A	445	453	Right-handed alpha
Helix 15	AB6	A	536	542	Right-handed alpha
Helix 16	AB7	A	543	545	Right-handed 310

There are 18 sheets in PDB entry 9UOU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	19	20	first strand
Strand 2	B	50	51	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	76	77	first strand
Strand 2	B	53	63	anti-parallel
Strand 3	B	222	233	anti-parallel
Strand 4	B	198	202	anti-parallel
Strand 5	B	85	88	anti-parallel
Strand 6	B	181	183	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	76	77	first strand
Strand 2	B	53	63	anti-parallel
Strand 3	B	222	233	anti-parallel
Strand 4	B	242	244	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	163	166	first strand
Strand 2	B	149	154	anti-parallel
Strand 3	B	136	141	anti-parallel
Strand 4	B	116	119	anti-parallel
Strand 5	B	173	175	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	123	124	first strand
Strand 2	B	129	130	anti-parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	267	269	first strand
Strand 2	B	512	517	anti-parallel
Strand 3	B	283	289	anti-parallel
Strand 4	B	306	322	anti-parallel
Strand 5	B	479	494	anti-parallel
Strand 6	B	500	505	anti-parallel
Strand 7	B	527	529	parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	443	444	first strand
Strand 2	B	341	344	anti-parallel
Strand 3	B	457	463	anti-parallel
Strand 4	B	479	494	anti-parallel
Strand 5	B	306	322	anti-parallel
Strand 6	B	331	335	anti-parallel
Strand 7	B	533	535	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	348	351	first strand
Strand 2	B	431	436	anti-parallel
Strand 3	B	365	369	anti-parallel
Strand 4	B	388	391	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	410	411	first strand
Strand 2	B	426	427	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	611	616	first strand
Strand 2	B	603	608	anti-parallel
Strand 3	B	592	597	anti-parallel
Strand 4	B	570	573	anti-parallel
Strand 5	B	620	622	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	76	78	first strand
Strand 2	A	51	63	anti-parallel
Strand 3	A	222	233	anti-parallel
Strand 4	A	198	202	anti-parallel
Strand 5	A	86	88	anti-parallel
Strand 6	A	178	182	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	76	78	first strand
Strand 2	A	51	63	anti-parallel
Strand 3	A	222	233	anti-parallel
Strand 4	A	242	244	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	160	166	first strand
Strand 2	A	147	155	anti-parallel
Strand 3	A	136	144	anti-parallel
Strand 4	A	116	118	anti-parallel
Strand 5	A	174	175	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	123	124	first strand
Strand 2	A	129	130	anti-parallel

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There are 7 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	267	269	first strand
Strand 2	A	512	517	anti-parallel
Strand 3	A	283	289	anti-parallel
Strand 4	A	306	322	anti-parallel
Strand 5	A	479	494	anti-parallel
Strand 6	A	500	505	anti-parallel
Strand 7	A	527	529	parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	341	345	first strand
Strand 2	A	457	463	anti-parallel
Strand 3	A	479	494	anti-parallel
Strand 4	A	306	322	anti-parallel
Strand 5	A	331	334	anti-parallel
Strand 6	A	533	535	anti-parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	348	351	first strand
Strand 2	A	431	436	anti-parallel
Strand 3	A	365	368	anti-parallel
Strand 4	A	388	391	anti-parallel
Strand 5	A	410	416	anti-parallel
Strand 6	A	425	427	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	612	616	first strand
Strand 2	A	603	607	anti-parallel
Strand 3	A	592	597	anti-parallel
Strand 4	A	570	573	anti-parallel
Strand 5	A	620	622	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9UOU

Analysis of interatomic Contacts of Structural Units in PDB entry:
9UOU