Analysis of interatomic Contacts of Structural Units in PDB entry:
9UOW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9UOW entry

There are 3 chains in PDB entry 9UOW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 80	HIS 521
B	SER 80	HIS 521
C	SER 80	HIS 521

There are 59 helices in PDB entry 9UOW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	99	113	Right-handed alpha
Helix 2	AA2	A	125	138	Right-handed alpha
Helix 3	AA3	A	160	164	Right-handed 310
Helix 4	AA4	A	177	192	Right-handed alpha
Helix 5	AA5	A	204	208	Right-handed 310
Helix 6	AA6	A	210	220	Right-handed alpha
Helix 7	AA7	A	255	266	Right-handed alpha
Helix 8	AA8	A	267	269	Right-handed 310
Helix 9	AA9	A	283	297	Right-handed alpha
Helix 10	AB1	A	329	344	Right-handed alpha
Helix 11	AB2	A	358	361	Right-handed 310
Helix 12	AB3	A	362	370	Right-handed alpha
Helix 13	AB4	A	406	417	Right-handed alpha
Helix 14	AB5	A	418	420	Right-handed 310
Helix 15	AB6	A	429	438	Right-handed 310
Helix 16	AB7	A	439	451	Right-handed alpha
Helix 17	AB8	A	479	488	Right-handed alpha
Helix 18	AB9	A	489	491	Right-handed 310
Helix 19	AC1	A	501	505	Right-handed 310
Helix 20	AC2	A	510	518	Right-handed alpha
Helix 21	AC3	B	99	113	Right-handed alpha
Helix 22	AC4	B	125	138	Right-handed alpha
Helix 23	AC5	B	160	164	Right-handed 310
Helix 24	AC6	B	177	192	Right-handed alpha
Helix 25	AC7	B	204	208	Right-handed 310
Helix 26	AC8	B	210	220	Right-handed alpha
Helix 27	AC9	B	255	266	Right-handed alpha
Helix 28	AD1	B	267	269	Right-handed 310
Helix 29	AD2	B	283	297	Right-handed alpha
Helix 30	AD3	B	329	344	Right-handed alpha
Helix 31	AD4	B	358	361	Right-handed 310
Helix 32	AD5	B	362	370	Right-handed alpha
Helix 33	AD6	B	406	417	Right-handed alpha
Helix 34	AD7	B	429	434	Right-handed 310
Helix 35	AD8	B	439	451	Right-handed alpha
Helix 36	AD9	B	479	488	Right-handed alpha
Helix 37	AE1	B	489	491	Right-handed 310
Helix 38	AE2	B	501	505	Right-handed 310
Helix 39	AE3	B	510	518	Right-handed alpha
Helix 40	AE4	C	99	113	Right-handed alpha
Helix 41	AE5	C	125	138	Right-handed alpha
Helix 42	AE6	C	160	164	Right-handed 310
Helix 43	AE7	C	177	192	Right-handed alpha
Helix 44	AE8	C	204	208	Right-handed 310
Helix 45	AE9	C	210	220	Right-handed alpha
Helix 46	AF1	C	255	266	Right-handed alpha
Helix 47	AF2	C	267	269	Right-handed 310
Helix 48	AF3	C	283	297	Right-handed alpha
Helix 49	AF4	C	329	344	Right-handed alpha
Helix 50	AF5	C	358	361	Right-handed 310
Helix 51	AF6	C	362	370	Right-handed alpha
Helix 52	AF7	C	406	417	Right-handed alpha
Helix 53	AF8	C	418	420	Right-handed 310
Helix 54	AF9	C	429	433	Right-handed 310
Helix 55	AG1	C	438	451	Right-handed alpha
Helix 56	AG2	C	479	488	Right-handed alpha
Helix 57	AG3	C	489	491	Right-handed 310
Helix 58	AG4	C	501	507	Right-handed 310
Helix 59	AG5	C	510	518	Right-handed alpha

There are 22 sheets in PDB entry 9UOW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	81	84	first strand
Strand 2	A	496	499	anti-parallel
Strand 3	A	473	474	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	89	90	first strand
Strand 2	A	519	520	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	92	95	first strand
Strand 2	A	346	350	parallel
Strand 3	A	380	384	anti-parallel
Strand 4	A	373	377	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	141	145	first strand
Strand 2	A	150	154	anti-parallel
Strand 3	A	116	120	anti-parallel
Strand 4	A	323	325	parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	169	173	first strand
Strand 2	A	196	200	parallel
Strand 3	A	235	238	anti-parallel
Strand 4	A	223	226	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	246	251	first strand
Strand 2	A	273	278	parallel
Strand 3	A	309	312	anti-parallel
Strand 4	A	302	303	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	400	402	first strand
Strand 2	A	424	427	parallel
Strand 3	A	461	464	anti-parallel
Strand 4	A	453	456	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	81	84	first strand
Strand 2	B	496	499	anti-parallel
Strand 3	B	473	474	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	89	90	first strand
Strand 2	B	519	520	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	92	95	first strand
Strand 2	B	346	350	parallel
Strand 3	B	380	384	anti-parallel
Strand 4	B	373	376	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	142	145	first strand
Strand 2	B	150	154	anti-parallel
Strand 3	B	116	120	anti-parallel
Strand 4	B	323	325	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	169	173	first strand
Strand 2	B	196	200	parallel
Strand 3	B	235	238	anti-parallel
Strand 4	B	223	226	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	246	251	first strand
Strand 2	B	273	278	parallel
Strand 3	B	309	312	anti-parallel
Strand 4	B	302	303	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	396	397	first strand
Strand 2	B	420	421	parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	400	402	first strand
Strand 2	B	424	427	parallel
Strand 3	B	461	464	anti-parallel
Strand 4	B	453	456	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	81	84	first strand
Strand 2	C	496	499	anti-parallel
Strand 3	C	473	474	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	89	90	first strand
Strand 2	C	519	520	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	92	95	first strand
Strand 2	C	346	350	parallel
Strand 3	C	380	384	anti-parallel
Strand 4	C	373	376	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	142	145	first strand
Strand 2	C	150	154	anti-parallel
Strand 3	C	116	120	anti-parallel
Strand 4	C	323	325	parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	169	173	first strand
Strand 2	C	196	200	parallel
Strand 3	C	235	238	anti-parallel
Strand 4	C	223	226	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	246	250	first strand
Strand 2	C	273	277	parallel
Strand 3	C	309	312	anti-parallel
Strand 4	C	302	303	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	400	402	first strand
Strand 2	C	424	427	parallel
Strand 3	C	460	464	anti-parallel
Strand 4	C	453	456	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9UOW

Analysis of interatomic Contacts of Structural Units in PDB entry:
9UOW