Analysis of interatomic Contacts of Structural Units in PDB entry:
9UOY

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9UOY entry

There are 3 chains in PDB entry 9UOY (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	LYS 2438
B	MET 1	LYS 2438
C	MET 1	LYS 2438

There are260 helices in PDB entry 9UOY. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	4	27	Right-handed alpha
Helix 2	AA2	A	29	43	Right-handed alpha
Helix 3	AA3	A	55	87	Right-handed alpha
Helix 4	AA4	A	97	107	Right-handed alpha
Helix 5	AA5	A	119	122	Right-handed 310
Helix 6	AA6	A	123	143	Right-handed alpha
Helix 7	AA7	A	180	204	Right-handed alpha
Helix 8	AA8	A	206	225	Right-handed alpha
Helix 9	AA9	A	230	257	Right-handed alpha
Helix 10	AB1	A	257	264	Right-handed alpha
Helix 11	AB2	A	269	275	Right-handed alpha
Helix 12	AB3	A	306	329	Right-handed alpha
Helix 13	AB4	A	450	481	Right-handed alpha
Helix 14	AB5	A	483	497	Right-handed alpha
Helix 15	AB6	A	501	528	Right-handed alpha
Helix 16	AB7	A	538	543	Right-handed alpha
Helix 17	AB8	A	551	583	Right-handed alpha
Helix 18	AB9	A	621	652	Right-handed alpha
Helix 19	AC1	A	656	676	Right-handed alpha
Helix 20	AC2	A	676	683	Right-handed alpha
Helix 21	AC3	A	683	706	Right-handed alpha
Helix 22	AC4	A	707	718	Right-handed alpha
Helix 23	AC5	A	721	729	Right-handed alpha
Helix 24	AC6	A	732	737	Right-handed alpha
Helix 25	AC7	A	738	760	Right-handed alpha
Helix 26	AC8	A	763	771	Right-handed alpha
Helix 27	AC9	A	809	845	Right-handed alpha
Helix 28	AD1	A	847	849	Right-handed 310
Helix 29	AD2	A	850	863	Right-handed alpha
Helix 30	AD3	A	869	891	Right-handed alpha
Helix 31	AD4	A	915	921	Right-handed alpha
Helix 32	AD5	A	930	935	Right-handed alpha
Helix 33	AD6	A	935	962	Right-handed alpha
Helix 34	AD7	A	965	970	Right-handed 310
Helix 35	AD8	A	977	983	Right-handed 310
Helix 36	AD9	A	984	1017	Right-handed alpha
Helix 37	AE1	A	1018	1033	Right-handed alpha
Helix 38	AE2	A	1035	1063	Right-handed alpha
Helix 39	AE3	A	1065	1069	Right-handed 310
Helix 40	AE4	A	1072	1076	Right-handed 310
Helix 41	AE5	A	1082	1093	Right-handed alpha
Helix 42	AE6	A	1103	1126	Right-handed alpha
Helix 43	AE7	A	1157	1169	Right-handed alpha
Helix 44	AE8	A	1169	1185	Right-handed alpha
Helix 45	AE9	A	1187	1204	Right-handed alpha
Helix 46	AF1	A	1210	1214	Right-handed 310
Helix 47	AF2	A	1215	1247	Right-handed alpha
Helix 48	AF3	A	1248	1253	Right-handed 310
Helix 49	AF4	A	1257	1269	Right-handed alpha
Helix 50	AF5	A	1284	1291	Right-handed alpha
Helix 51	AF6	A	1301	1318	Right-handed alpha
Helix 52	AF7	A	1319	1330	Right-handed alpha
Helix 53	AF8	A	1335	1384	Right-handed alpha
Helix 54	AF9	A	1393	1399	Right-handed alpha
Helix 55	AG1	A	1402	1406	Right-handed 310
Helix 56	AG2	A	1597	1599	Right-handed 310
Helix 57	AG3	A	1600	1613	Right-handed alpha
Helix 58	AG4	A	1613	1629	Right-handed alpha
Helix 59	AG5	A	1635	1645	Right-handed alpha
Helix 60	AG6	A	1653	1675	Right-handed alpha
Helix 61	AG7	A	1679	1682	Right-handed 310
Helix 62	AG8	A	1683	1690	Right-handed alpha
Helix 63	AG9	A	1696	1702	Right-handed alpha
Helix 64	AH1	A	1711	1731	Right-handed alpha
Helix 65	AH2	A	1810	1822	Right-handed alpha
Helix 66	AH3	A	1831	1849	Right-handed alpha
Helix 67	AH4	A	1850	1854	Right-handed 310
Helix 68	AH5	A	1871	1895	Right-handed alpha
Helix 69	AH6	A	1896	1924	Right-handed alpha
Helix 70	AH7	A	1930	1954	Right-handed alpha
Helix 71	AH8	A	1969	1982	Right-handed alpha
Helix 72	AH9	A	1985	1997	Right-handed alpha
Helix 73	AI1	A	2002	2029	Right-handed alpha
Helix 74	AI2	A	2038	2068	Right-handed alpha
Helix 75	AI3	A	2110	2123	Right-handed alpha
Helix 76	AI4	A	2129	2145	Right-handed alpha
Helix 77	AI5	A	2167	2178	Right-handed alpha
Helix 78	AI6	A	2217	2230	Right-handed alpha
Helix 79	AI7	A	2257	2268	Right-handed alpha
Helix 80	AI8	A	2278	2283	Right-handed alpha
Helix 81	AI9	A	2299	2303	Right-handed 310
Helix 82	AJ1	A	2347	2352	Right-handed alpha
Helix 83	AJ2	A	2354	2376	Right-handed alpha
Helix 84	AJ3	A	2382	2387	Right-handed alpha
Helix 85	AJ4	A	2391	2407	Right-handed alpha
Helix 86	AJ5	A	2410	2426	Right-handed alpha
Helix 87	AJ6	A	2426	2433	Right-handed alpha
Helix 88	AJ7	B	4	27	Right-handed alpha
Helix 89	AJ8	B	29	43	Right-handed alpha
Helix 90	AJ9	B	55	87	Right-handed alpha
Helix 91	AK1	B	97	107	Right-handed alpha
Helix 92	AK2	B	119	122	Right-handed 310
Helix 93	AK3	B	123	143	Right-handed alpha
Helix 94	AK4	B	180	204	Right-handed alpha
Helix 95	AK5	B	206	225	Right-handed alpha
Helix 96	AK6	B	230	257	Right-handed alpha
Helix 97	AK7	B	257	264	Right-handed alpha
Helix 98	AK8	B	269	275	Right-handed alpha
Helix 99	AK9	B	306	329	Right-handed alpha
Helix 100	AL1	B	450	481	Right-handed alpha
Helix 101	AL2	B	483	497	Right-handed alpha
Helix 102	AL3	B	501	528	Right-handed alpha
Helix 103	AL4	B	538	543	Right-handed alpha
Helix 104	AL5	B	551	583	Right-handed alpha
Helix 105	AL6	B	621	652	Right-handed alpha
Helix 106	AL7	B	656	676	Right-handed alpha
Helix 107	AL8	B	676	683	Right-handed alpha
Helix 108	AL9	B	683	706	Right-handed alpha
Helix 109	AM1	B	707	718	Right-handed alpha
Helix 110	AM2	B	721	729	Right-handed alpha
Helix 111	AM3	B	732	737	Right-handed alpha
Helix 112	AM4	B	738	760	Right-handed alpha
Helix 113	AM5	B	763	771	Right-handed alpha
Helix 114	AM6	B	809	845	Right-handed alpha
Helix 115	AM7	B	847	849	Right-handed 310
Helix 116	AM8	B	850	863	Right-handed alpha
Helix 117	AM9	B	869	891	Right-handed alpha
Helix 118	AN1	B	915	921	Right-handed alpha
Helix 119	AN2	B	930	935	Right-handed alpha
Helix 120	AN3	B	935	962	Right-handed alpha
Helix 121	AN4	B	965	970	Right-handed 310
Helix 122	AN5	B	977	983	Right-handed 310
Helix 123	AN6	B	984	1017	Right-handed alpha
Helix 124	AN7	B	1018	1033	Right-handed alpha
Helix 125	AN8	B	1035	1063	Right-handed alpha
Helix 126	AN9	B	1065	1069	Right-handed 310
Helix 127	AO1	B	1072	1076	Right-handed 310
Helix 128	AO2	B	1082	1093	Right-handed alpha
Helix 129	AO3	B	1103	1126	Right-handed alpha
Helix 130	AO4	B	1157	1169	Right-handed alpha
Helix 131	AO5	B	1169	1185	Right-handed alpha
Helix 132	AO6	B	1187	1204	Right-handed alpha
Helix 133	AO7	B	1210	1214	Right-handed 310
Helix 134	AO8	B	1215	1247	Right-handed alpha
Helix 135	AO9	B	1248	1253	Right-handed 310
Helix 136	AP1	B	1257	1269	Right-handed alpha
Helix 137	AP2	B	1284	1291	Right-handed alpha
Helix 138	AP3	B	1301	1318	Right-handed alpha
Helix 139	AP4	B	1319	1330	Right-handed alpha
Helix 140	AP5	B	1335	1384	Right-handed alpha
Helix 141	AP6	B	1393	1399	Right-handed alpha
Helix 142	AP7	B	1402	1406	Right-handed 310
Helix 143	AP8	B	1597	1599	Right-handed 310
Helix 144	AP9	B	1600	1613	Right-handed alpha
Helix 145	AQ1	B	1613	1629	Right-handed alpha
Helix 146	AQ2	B	1635	1645	Right-handed alpha
Helix 147	AQ3	B	1653	1675	Right-handed alpha
Helix 148	AQ4	B	1679	1682	Right-handed 310
Helix 149	AQ5	B	1683	1690	Right-handed alpha
Helix 150	AQ6	B	1696	1702	Right-handed alpha
Helix 151	AQ7	B	1711	1731	Right-handed alpha
Helix 152	AQ8	B	1810	1822	Right-handed alpha
Helix 153	AQ9	B	1831	1849	Right-handed alpha
Helix 154	AR1	B	1850	1854	Right-handed 310
Helix 155	AR2	B	1871	1895	Right-handed alpha
Helix 156	AR3	B	1896	1924	Right-handed alpha
Helix 157	AR4	B	1930	1954	Right-handed alpha
Helix 158	AR5	B	1969	1982	Right-handed alpha
Helix 159	AR6	B	1985	1997	Right-handed alpha
Helix 160	AR7	B	2002	2029	Right-handed alpha
Helix 161	AR8	B	2038	2068	Right-handed alpha
Helix 162	AR9	B	2110	2123	Right-handed alpha
Helix 163	AS1	B	2129	2145	Right-handed alpha
Helix 164	AS2	B	2167	2178	Right-handed alpha
Helix 165	AS3	B	2217	2230	Right-handed alpha
Helix 166	AS4	B	2257	2268	Right-handed alpha
Helix 167	AS5	B	2278	2283	Right-handed alpha
Helix 168	AS6	B	2299	2303	Right-handed 310
Helix 169	AS7	B	2347	2352	Right-handed alpha
Helix 170	AS8	B	2354	2376	Right-handed alpha
Helix 171	AS9	B	2382	2387	Right-handed alpha
Helix 172	AT1	B	2391	2407	Right-handed alpha
Helix 173	AT2	B	2410	2426	Right-handed alpha
Helix 174	AT3	B	2426	2433	Right-handed alpha
Helix 175	AT4	C	4	27	Right-handed alpha
Helix 176	AT5	C	29	43	Right-handed alpha
Helix 177	AT6	C	55	87	Right-handed alpha
Helix 178	AT7	C	97	107	Right-handed alpha
Helix 179	AT8	C	119	122	Right-handed 310
Helix 180	AT9	C	123	143	Right-handed alpha
Helix 181	AU1	C	180	204	Right-handed alpha
Helix 182	AU2	C	206	225	Right-handed alpha
Helix 183	AU3	C	230	257	Right-handed alpha
Helix 184	AU4	C	257	264	Right-handed alpha
Helix 185	AU5	C	269	275	Right-handed alpha
Helix 186	AU6	C	306	329	Right-handed alpha
Helix 187	AU7	C	450	481	Right-handed alpha
Helix 188	AU8	C	483	497	Right-handed alpha
Helix 189	AU9	C	501	528	Right-handed alpha
Helix 190	AV1	C	538	543	Right-handed alpha
Helix 191	AV2	C	551	583	Right-handed alpha
Helix 192	AV3	C	621	652	Right-handed alpha
Helix 193	AV4	C	656	676	Right-handed alpha
Helix 194	AV5	C	676	683	Right-handed alpha
Helix 195	AV6	C	683	706	Right-handed alpha
Helix 196	AV7	C	707	718	Right-handed alpha
Helix 197	AV8	C	721	729	Right-handed alpha
Helix 198	AV9	C	732	737	Right-handed alpha
Helix 199	AW1	C	738	760	Right-handed alpha
Helix 200	AW2	C	763	771	Right-handed alpha
Helix 201	AW3	C	809	845	Right-handed alpha
Helix 202	AW4	C	847	849	Right-handed 310
Helix 203	AW5	C	850	863	Right-handed alpha
Helix 204	AW6	C	869	891	Right-handed alpha
Helix 205	AW7	C	915	921	Right-handed alpha
Helix 206	AW8	C	930	935	Right-handed alpha
Helix 207	AW9	C	935	962	Right-handed alpha
Helix 208	AX1	C	965	970	Right-handed 310
Helix 209	AX2	C	977	983	Right-handed 310
Helix 210	AX3	C	984	1017	Right-handed alpha
Helix 211	AX4	C	1018	1033	Right-handed alpha
Helix 212	AX5	C	1035	1063	Right-handed alpha
Helix 213	AX6	C	1065	1069	Right-handed 310
Helix 214	AX7	C	1072	1076	Right-handed 310
Helix 215	AX8	C	1082	1093	Right-handed alpha
Helix 216	AX9	C	1103	1126	Right-handed alpha
Helix 217	AY1	C	1157	1169	Right-handed alpha
Helix 218	AY2	C	1169	1185	Right-handed alpha
Helix 219	AY3	C	1187	1204	Right-handed alpha
Helix 220	AY4	C	1210	1214	Right-handed 310
Helix 221	AY5	C	1215	1247	Right-handed alpha
Helix 222	AY6	C	1248	1253	Right-handed 310
Helix 223	AY7	C	1257	1269	Right-handed alpha
Helix 224	AY8	C	1284	1291	Right-handed alpha
Helix 225	AY9	C	1301	1318	Right-handed alpha
Helix 226	AZ1	C	1319	1330	Right-handed alpha
Helix 227	AZ2	C	1335	1384	Right-handed alpha
Helix 228	AZ3	C	1393	1399	Right-handed alpha
Helix 229	AZ4	C	1402	1406	Right-handed 310
Helix 230	AZ5	C	1597	1599	Right-handed 310
Helix 231	AZ6	C	1600	1613	Right-handed alpha
Helix 232	AZ7	C	1613	1629	Right-handed alpha
Helix 233	AZ8	C	1635	1645	Right-handed alpha
Helix 234	AZ9	C	1653	1675	Right-handed alpha
Helix 235	BA1	C	1683	1690	Right-handed alpha
Helix 236	BA2	C	1696	1702	Right-handed alpha
Helix 237	BA3	C	1711	1731	Right-handed alpha
Helix 238	BA4	C	1810	1822	Right-handed alpha
Helix 239	BA5	C	1831	1849	Right-handed alpha
Helix 240	BA6	C	1850	1854	Right-handed 310
Helix 241	BA7	C	1871	1895	Right-handed alpha
Helix 242	BA8	C	1896	1924	Right-handed alpha
Helix 243	BA9	C	1930	1954	Right-handed alpha
Helix 244	BB1	C	1969	1982	Right-handed alpha
Helix 245	BB2	C	1985	1997	Right-handed alpha
Helix 246	BB3	C	2002	2029	Right-handed alpha
Helix 247	BB4	C	2038	2068	Right-handed alpha
Helix 248	BB5	C	2110	2123	Right-handed alpha
Helix 249	BB6	C	2129	2145	Right-handed alpha
Helix 250	BB7	C	2167	2178	Right-handed alpha
Helix 251	BB8	C	2217	2230	Right-handed alpha
Helix 252	BB9	C	2257	2268	Right-handed alpha
Helix 253	BC1	C	2278	2283	Right-handed alpha
Helix 254	BC2	C	2299	2303	Right-handed 310
Helix 255	BC3	C	2347	2352	Right-handed alpha
Helix 256	BC4	C	2354	2376	Right-handed alpha
Helix 257	BC5	C	2382	2387	Right-handed alpha
Helix 258	BC6	C	2391	2407	Right-handed alpha
Helix 259	BC7	C	2410	2426	Right-handed alpha
Helix 260	BC8	C	2426	2433	Right-handed alpha

There are 12 sheets in PDB entry 9UOY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2090	2095	first strand
Strand 2	A	2078	2085	anti-parallel
Strand 3	A	2185	2193	anti-parallel
Strand 4	A	2205	2209	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2090	2095	first strand
Strand 2	A	2078	2085	anti-parallel
Strand 3	A	2185	2193	anti-parallel
Strand 4	A	2212	2213	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2106	2108	first strand
Strand 2	A	2151	2156	anti-parallel
Strand 3	A	2334	2340	anti-parallel
Strand 4	A	2245	2248	parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2236	2237	first strand
Strand 2	A	2289	2294	anti-parallel
Strand 3	A	2305	2310	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2090	2095	first strand
Strand 2	B	2078	2085	anti-parallel
Strand 3	B	2185	2193	anti-parallel
Strand 4	B	2205	2209	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2090	2095	first strand
Strand 2	B	2078	2085	anti-parallel
Strand 3	B	2185	2193	anti-parallel
Strand 4	B	2212	2213	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2106	2108	first strand
Strand 2	B	2151	2156	anti-parallel
Strand 3	B	2334	2340	anti-parallel
Strand 4	B	2245	2248	parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2236	2237	first strand
Strand 2	B	2289	2294	anti-parallel
Strand 3	B	2305	2310	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2090	2095	first strand
Strand 2	C	2078	2085	anti-parallel
Strand 3	C	2185	2193	anti-parallel
Strand 4	C	2205	2209	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2090	2095	first strand
Strand 2	C	2078	2085	anti-parallel
Strand 3	C	2185	2193	anti-parallel
Strand 4	C	2212	2213	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2106	2108	first strand
Strand 2	C	2151	2156	anti-parallel
Strand 3	C	2334	2340	anti-parallel
Strand 4	C	2245	2248	parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2236	2237	first strand
Strand 2	C	2289	2294	anti-parallel
Strand 3	C	2305	2310	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9UOY

Analysis of interatomic Contacts of Structural Units in PDB entry:
9UOY