Analysis of interatomic Contacts of Structural Units in PDB entry:
9UQ0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9UQ0 entry

There are 6 chains in PDB entry 9UQ0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
2	TRP 185	GLN 902
3	ALA 15	ILE 808
4	ASN 158	LEU 863
5	GLY 24	LEU 733
6	ASP 20	LEU 787
7	ASP 5	LEU 644

There are151 helices in PDB entry 9UQ0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	2	191	206	Right-handed alpha
Helix 2	AA2	2	213	224	Right-handed alpha
Helix 3	AA3	2	234	239	Right-handed alpha
Helix 4	AA4	2	241	251	Right-handed alpha
Helix 5	AA5	2	251	271	Right-handed alpha
Helix 6	AA6	2	272	276	Right-handed 310
Helix 7	AA7	2	293	297	Right-handed 310
Helix 8	AA8	2	298	302	Right-handed 310
Helix 9	AA9	2	399	403	Right-handed 310
Helix 10	AB1	2	446	451	Right-handed 310
Helix 11	AB2	2	459	470	Right-handed alpha
Helix 12	AB3	2	472	477	Right-handed alpha
Helix 13	AB4	2	488	501	Right-handed alpha
Helix 14	AB5	2	528	540	Right-handed alpha
Helix 15	AB6	2	574	579	Right-handed alpha
Helix 16	AB7	2	593	606	Right-handed alpha
Helix 17	AB8	2	612	616	Right-handed 310
Helix 18	AB9	2	632	636	Right-handed 310
Helix 19	AC1	2	642	647	Right-handed alpha
Helix 20	AC2	2	650	656	Right-handed alpha
Helix 21	AC3	2	668	686	Right-handed alpha
Helix 22	AC4	2	719	728	Right-handed alpha
Helix 23	AC5	2	739	758	Right-handed alpha
Helix 24	AC6	2	763	781	Right-handed alpha
Helix 25	AC7	2	787	803	Right-handed alpha
Helix 26	AC8	2	807	818	Right-handed alpha
Helix 27	AC9	2	827	851	Right-handed alpha
Helix 28	AD1	2	862	873	Right-handed alpha
Helix 29	AD2	2	877	882	Right-handed alpha
Helix 30	AD3	2	883	889	Right-handed alpha
Helix 31	AD4	3	30	35	Right-handed alpha
Helix 32	AD5	3	38	43	Right-handed alpha
Helix 33	AD6	3	51	58	Right-handed alpha
Helix 34	AD7	3	59	68	Right-handed alpha
Helix 35	AD8	3	69	86	Right-handed alpha
Helix 36	AD9	3	88	94	Right-handed alpha
Helix 37	AE1	3	117	121	Right-handed 310
Helix 38	AE2	3	279	291	Right-handed alpha
Helix 39	AE3	3	295	302	Right-handed alpha
Helix 40	AE4	3	310	323	Right-handed alpha
Helix 41	AE5	3	350	361	Right-handed alpha
Helix 42	AE6	3	411	414	Right-handed 310
Helix 43	AE7	3	415	427	Right-handed alpha
Helix 44	AE8	3	464	469	Right-handed alpha
Helix 45	AE9	3	472	478	Right-handed alpha
Helix 46	AF1	3	490	507	Right-handed alpha
Helix 47	AF2	3	564	574	Right-handed alpha
Helix 48	AF3	3	583	598	Right-handed alpha
Helix 49	AF4	3	615	631	Right-handed alpha
Helix 50	AF5	3	638	654	Right-handed alpha
Helix 51	AF6	3	741	759	Right-handed alpha
Helix 52	AF7	3	765	776	Right-handed alpha
Helix 53	AF8	3	781	795	Right-handed alpha
Helix 54	AF9	4	194	199	Right-handed 310
Helix 55	AG1	4	211	219	Right-handed alpha
Helix 56	AG2	4	219	229	Right-handed alpha
Helix 57	AG3	4	229	248	Right-handed alpha
Helix 58	AG4	4	275	279	Right-handed 310
Helix 59	AG5	4	444	455	Right-handed alpha
Helix 60	AG6	4	457	465	Right-handed alpha
Helix 61	AG7	4	473	486	Right-handed alpha
Helix 62	AG8	4	517	527	Right-handed alpha
Helix 63	AG9	4	561	566	Right-handed alpha
Helix 64	AH1	4	580	593	Right-handed alpha
Helix 65	AH2	4	629	635	Right-handed alpha
Helix 66	AH3	4	637	643	Right-handed alpha
Helix 67	AH4	4	655	671	Right-handed alpha
Helix 68	AH5	4	675	698	Right-handed alpha
Helix 69	AH6	4	703	723	Right-handed alpha
Helix 70	AH7	4	731	748	Right-handed alpha
Helix 71	AH8	4	754	772	Right-handed alpha
Helix 72	AH9	4	800	811	Right-handed alpha
Helix 73	AI1	4	820	831	Right-handed alpha
Helix 74	AI2	4	836	847	Right-handed alpha
Helix 75	AI3	5	30	40	Right-handed alpha
Helix 76	AI4	5	53	63	Right-handed alpha
Helix 77	AI5	5	73	78	Right-handed alpha
Helix 78	AI6	5	82	89	Right-handed alpha
Helix 79	AI7	5	91	96	Right-handed alpha
Helix 80	AI8	5	97	99	Right-handed 310
Helix 81	AI9	5	100	107	Right-handed alpha
Helix 82	AJ1	5	136	140	Right-handed 310
Helix 83	AJ2	5	250	254	Right-handed 310
Helix 84	AJ3	5	316	328	Right-handed alpha
Helix 85	AJ4	5	331	339	Right-handed alpha
Helix 86	AJ5	5	346	359	Right-handed alpha
Helix 87	AJ6	5	383	388	Right-handed alpha
Helix 88	AJ7	5	391	398	Right-handed alpha
Helix 89	AJ8	5	432	437	Right-handed alpha
Helix 90	AJ9	5	446	450	Right-handed 310
Helix 91	AK1	5	457	462	Right-handed alpha
Helix 92	AK2	5	555	568	Right-handed alpha
Helix 93	AK3	5	575	591	Right-handed alpha
Helix 94	AK4	5	597	602	Right-handed alpha
Helix 95	AK5	5	609	627	Right-handed alpha
Helix 96	AK6	5	633	643	Right-handed alpha
Helix 97	AK7	5	647	652	Right-handed alpha
Helix 98	AK8	5	664	667	Right-handed 310
Helix 99	AK9	5	668	683	Right-handed alpha
Helix 100	AL1	5	691	700	Right-handed alpha
Helix 101	AL2	5	704	719	Right-handed alpha
Helix 102	AL3	6	21	36	Right-handed alpha
Helix 103	AL4	6	44	54	Right-handed alpha
Helix 104	AL5	6	65	70	Right-handed alpha
Helix 105	AL6	6	72	82	Right-handed alpha
Helix 106	AL7	6	82	100	Right-handed alpha
Helix 107	AL8	6	122	126	Right-handed 310
Helix 108	AL9	6	186	189	Right-handed 310
Helix 109	AM1	6	231	233	Right-handed 310
Helix 110	AM2	6	321	329	Right-handed alpha
Helix 111	AM3	6	330	343	Right-handed alpha
Helix 112	AM4	6	345	355	Right-handed alpha
Helix 113	AM5	6	361	374	Right-handed alpha
Helix 114	AM6	6	401	412	Right-handed alpha
Helix 115	AM7	6	437	440	Right-handed 310
Helix 116	AM8	6	462	465	Right-handed 310
Helix 117	AM9	6	466	476	Right-handed alpha
Helix 118	AN1	6	515	520	Right-handed alpha
Helix 119	AN2	6	523	530	Right-handed alpha
Helix 120	AN3	6	542	558	Right-handed alpha
Helix 121	AN4	6	571	580	Right-handed alpha
Helix 122	AN5	6	587	605	Right-handed alpha
Helix 123	AN6	6	617	635	Right-handed alpha
Helix 124	AN7	6	641	656	Right-handed alpha
Helix 125	AN8	6	721	739	Right-handed alpha
Helix 126	AN9	6	749	759	Right-handed alpha
Helix 127	AO1	6	767	777	Right-handed alpha
Helix 128	AO2	7	6	10	Right-handed alpha
Helix 129	AO3	7	31	42	Right-handed alpha
Helix 130	AO4	7	51	56	Right-handed alpha
Helix 131	AO5	7	59	69	Right-handed alpha
Helix 132	AO6	7	69	85	Right-handed alpha
Helix 133	AO7	7	128	132	Right-handed 310
Helix 134	AO8	7	148	153	Right-handed alpha
Helix 135	AO9	7	208	213	Right-handed 310
Helix 136	AP1	7	241	244	Right-handed 310
Helix 137	AP2	7	326	330	Right-handed 310
Helix 138	AP3	7	332	340	Right-handed alpha
Helix 139	AP4	7	347	360	Right-handed alpha
Helix 140	AP5	7	386	398	Right-handed alpha
Helix 141	AP6	7	424	428	Right-handed 310
Helix 142	AP7	7	446	450	Right-handed 310
Helix 143	AP8	7	451	464	Right-handed alpha
Helix 144	AP9	7	500	505	Right-handed alpha
Helix 145	AQ1	7	508	515	Right-handed alpha
Helix 146	AQ2	7	526	544	Right-handed alpha
Helix 147	AQ3	7	555	568	Right-handed alpha
Helix 148	AQ4	7	574	576	Right-handed 310
Helix 149	AQ5	7	577	596	Right-handed alpha
Helix 150	AQ6	7	602	620	Right-handed alpha
Helix 151	AQ7	7	626	641	Right-handed alpha

There are 38 sheets in PDB entry 9UQ0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	229	233	first strand
Strand 2	2	282	286	parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	304	305	first strand
Strand 2	2	417	422	anti-parallel
Strand 3	2	435	440	anti-parallel
Strand 4	2	393	398	parallel
Strand 5	2	374	379	anti-parallel
Strand 6	2	308	315	anti-parallel
Strand 7	2	411	414	anti-parallel

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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	304	305	first strand
Strand 2	2	417	422	anti-parallel
Strand 3	2	435	440	anti-parallel
Strand 4	2	393	398	parallel
Strand 5	2	374	379	anti-parallel
Strand 6	2	308	315	anti-parallel
Strand 7	2	569	572	anti-parallel
Strand 8	2	559	562	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	322	329	first strand
Strand 2	2	361	370	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	519	522	first strand
Strand 2	2	624	630	parallel
Strand 3	2	582	587	parallel
Strand 4	2	543	546	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	608	611	first strand
Strand 2	2	618	621	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	47	50	first strand
Strand 2	3	100	103	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	124	126	first strand
Strand 2	3	234	240	anti-parallel
Strand 3	3	129	134	anti-parallel
Strand 4	3	264	267	first strand

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	259	261	first strand
Strand 2	3	217	221	parallel
Strand 3	3	197	202	anti-parallel
Strand 4	3	129	134	anti-parallel
Strand 5	3	234	240	anti-parallel
Strand 6	3	393	394	first strand

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	368	369	first strand
Strand 2	3	408	409	parallel
Strand 3	3	449	451	parallel
Strand 4	3	341	342	parallel
Strand 5	3	481	482	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	430	432	first strand
Strand 2	3	441	443	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	581	582	first strand
Strand 2	3	636	637	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	762	764	first strand
Strand 2	3	804	806	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	281	286	first strand
Strand 2	4	390	396	anti-parallel
Strand 3	4	414	420	anti-parallel
Strand 4	4	370	375	parallel
Strand 5	4	349	354	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	313	315	first strand
Strand 2	4	302	306	anti-parallel
Strand 3	4	337	338	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	408	409	first strand
Strand 2	7	199	200	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	533	534	first strand
Strand 2	4	570	574	parallel
Strand 3	4	612	617	parallel
Strand 4	4	506	510	parallel
Strand 5	4	646	650	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	546	550	first strand
Strand 2	4	555	559	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	595	596	first strand
Strand 2	4	607	608	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	599	600	first strand
Strand 2	4	603	604	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	154	155	first strand
Strand 2	5	226	230	anti-parallel
Strand 3	5	244	248	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	377	379	first strand
Strand 2	5	516	518	parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	401	403	first strand
Strand 2	5	441	443	parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	573	574	first strand
Strand 2	5	631	632	parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	689	690	first strand
Strand 2	5	729	732	anti-parallel
Strand 3	5	721	724	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	60	64	first strand
Strand 2	6	111	115	parallel

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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	135	138	first strand
Strand 2	6	242	246	anti-parallel
Strand 3	6	302	305	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	140	144	first strand
Strand 2	6	199	209	anti-parallel
Strand 3	6	148	158	anti-parallel
Strand 4	6	191	193	anti-parallel

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There are 6 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	164	169	first strand
Strand 2	6	148	158	anti-parallel
Strand 3	6	199	209	anti-parallel
Strand 4	6	223	229	anti-parallel
Strand 5	6	295	300	parallel
Strand 6	6	249	251	anti-parallel

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There are 5 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	417	420	first strand
Strand 2	6	456	460	parallel
Strand 3	6	498	502	parallel
Strand 4	6	392	396	parallel
Strand 5	6	532	536	parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	433	435	first strand
Strand 2	6	442	444	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	481	482	first strand
Strand 2	6	493	494	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	585	586	first strand
Strand 2	6	639	640	parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	47	49	first strand
Strand 2	7	135	137	parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	238	239	first strand
Strand 2	7	163	167	anti-parallel
Strand 3	7	269	273	anti-parallel

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There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	174	177	first strand
Strand 2	7	229	235	anti-parallel
Strand 3	7	255	258	anti-parallel

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There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	190	194	first strand
Strand 2	7	179	184	anti-parallel
Strand 3	7	220	222	anti-parallel

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There are 5 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	401	402	first strand
Strand 2	7	441	442	parallel
Strand 3	7	483	488	parallel
Strand 4	7	377	381	parallel
Strand 5	7	517	521	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9UQ0

Analysis of interatomic Contacts of Structural Units in PDB entry:
9UQ0