Analysis of interatomic Contacts of Structural Units in PDB entry:
9US5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9US5 entry

There is 1 chain in PDB entry 9US5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 120GLN 677
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 9US5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
185 188Right-handed 310
Helix 2
AA2
A
195 199Right-handed 310
Helix 3
AA3
A
203 207Right-handed 310
Helix 4
AA4
A
208 212Right-handed 310
Helix 5
AA5
A
227 233Right-handed alpha
Helix 6
AA6
A
234 241Right-handed alpha
Helix 7
AA7
A
289 303Right-handed alpha
Helix 8
AA8
A
320 328Right-handed alpha
Helix 9
AA9
A
335 343Right-handed alpha
Helix 10
AB1
A
346 350Right-handed 310
Helix 11
AB2
A
359 364Right-handed 310
Helix 12
AB3
A
369 374Right-handed alpha
Helix 13
AB4
A
400 404Right-handed 310
Helix 14
AB5
A
418 424Right-handed 310
Helix 15
AB6
A
436 453Right-handed alpha
Helix 16
AB7
A
461 465Right-handed 310
Helix 17
AB8
A
466 488Right-handed alpha
Helix 18
AB9
A
512 517Right-handed 310
Helix 19
AC1
A
526 533Right-handed alpha
Helix 20
AC2
A
537 540Right-handed 310
Helix 21
AC3
A
541 552Right-handed alpha
Helix 22
AC4
A
572 574Right-handed 310
Helix 23
AC5
A
575 582Right-handed alpha
Helix 24
AC6
A
592 596Right-handed 310
Helix 25
AC7
A
607 612Right-handed 310
Helix 26
AC8
A
615 620Right-handed alpha
Helix 27
AC9
A
623 640Right-handed alpha
Helix 28
AD1
A
640 646Right-handed alpha
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There are 6 sheets in PDB entry 9US5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
129 132first strand
Strand 2
A
158 161anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
151 153first strand
Strand 2
A
142 145anti-parallel
Strand 3
A
170 175anti-parallel
Strand 4
A
666 672anti-parallel
Strand 5
A
657 663anti-parallel
Strand 6
A
647 650anti-parallel
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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
190 194first strand
Strand 2
A
245 248parallel
Strand 3
A
306 311parallel
Strand 4
A
456 459parallel
Strand 5
A
499 502parallel
Strand 6
A
521 524parallel
Strand 7
A
557 560parallel
Strand 8
A
586 590parallel
Strand 9
A
190 194parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
252 254first strand
Strand 2
A
277 283anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
258 260first strand
Strand 2
A
268 270anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
382 383first strand
Strand 2
A
406 407anti-parallel
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