Analysis of interatomic Contacts of Structural Units in PDB entry:
9UTA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9UTA entry

There are 2 chains in PDB entry 9UTA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 518GLY 833
B
 THR 539ASN 824
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 27 helices in PDB entry 9UTA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
563 589Right-handed alpha
Helix 2
AA2
A
593 599Right-handed alpha
Helix 3
AA3
A
601 618Right-handed alpha
Helix 4
AA4
A
619 621Right-handed 310
Helix 5
AA5
A
626 636Right-handed alpha
Helix 6
AA6
A
636 665Right-handed alpha
Helix 7
AA7
A
668 676Right-handed alpha
Helix 8
AA8
A
677 700Right-handed alpha
Helix 9
AA9
A
720 723Right-handed 310
Helix 10
AB1
A
724 730Right-handed alpha
Helix 11
AB2
A
733 749Right-handed alpha
Helix 12
AB3
A
758 783Right-handed alpha
Helix 13
AB4
A
787 805Right-handed alpha
Helix 14
AB5
A
808 818Right-handed alpha
Helix 15
AB6
A
823 833Right-handed alpha
Helix 16
AB7
B
566 593Right-handed alpha
Helix 17
AB8
B
596 603Right-handed alpha
Helix 18
AB9
B
604 620Right-handed alpha
Helix 19
AC1
B
621 623Right-handed 310
Helix 20
AC2
B
629 635Right-handed alpha
Helix 21
AC3
B
637 663Right-handed alpha
Helix 22
AC4
B
665 677Right-handed alpha
Helix 23
AC5
B
679 703Right-handed alpha
Helix 24
AC6
B
727 749Right-handed alpha
Helix 25
AC7
B
759 784Right-handed alpha
Helix 26
AC8
B
790 806Right-handed alpha
Helix 27
AC9
B
809 824Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 9UTA. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
555 557first strand
Strand 2
A
715 719parallel
Strand 3
A
705 708anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
558 560first strand
Strand 2
B
717 723parallel
Strand 3
B
706 714anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il