Analysis of interatomic Contacts of Structural Units in PDB entry:
9UTC

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9UTC entry

There are 2 chains in PDB entry 9UTC (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 26	PHE 552
B	PRO 22	ARG 556

There are 31 helices in PDB entry 9UTC. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	65	85	Right-handed alpha
Helix 2	AA2	A	108	114	Right-handed alpha
Helix 3	AA3	A	143	155	Right-handed alpha
Helix 4	AA4	A	168	173	Right-handed 310
Helix 5	AA5	A	186	201	Right-handed alpha
Helix 6	AA6	A	213	230	Right-handed alpha
Helix 7	AA7	A	250	267	Right-handed alpha
Helix 8	AA8	A	277	291	Right-handed alpha
Helix 9	AA9	A	309	314	Right-handed 310
Helix 10	AB1	A	315	320	Right-handed 310
Helix 11	AB2	A	334	341	Right-handed alpha
Helix 12	AB3	A	365	373	Right-handed alpha
Helix 13	AB4	A	373	381	Right-handed alpha
Helix 14	AB5	A	384	404	Right-handed alpha
Helix 15	AB6	A	416	425	Right-handed alpha
Helix 16	AB7	B	26	30	Right-handed 310
Helix 17	AB8	B	66	86	Right-handed alpha
Helix 18	AB9	B	106	116	Right-handed alpha
Helix 19	AC1	B	146	161	Right-handed alpha
Helix 20	AC2	B	189	204	Right-handed alpha
Helix 21	AC3	B	216	234	Right-handed alpha
Helix 22	AC4	B	250	266	Right-handed alpha
Helix 23	AC5	B	276	290	Right-handed alpha
Helix 24	AC6	B	306	311	Right-handed alpha
Helix 25	AC7	B	333	345	Right-handed alpha
Helix 26	AC8	B	347	356	Right-handed alpha
Helix 27	AC9	B	370	375	Right-handed alpha
Helix 28	AD1	B	377	382	Right-handed alpha
Helix 29	AD2	B	389	408	Right-handed alpha
Helix 30	AD3	B	422	431	Right-handed alpha
Helix 31	AD4	B	482	485	Right-handed 310

There are 14 sheets in PDB entry 9UTC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	94	98	first strand
Strand 2	A	33	37	parallel
Strand 3	A	135	139	parallel
Strand 4	A	161	162	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	42	43	first strand
Strand 2	A	63	64	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	121	123	first strand
Strand 2	B	124	126	anti-parallel

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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	233	239	first strand
Strand 2	A	205	210	parallel
Strand 3	A	271	274	parallel
Strand 4	A	297	300	parallel
Strand 5	A	321	327	parallel
Strand 6	A	448	453	anti-parallel
Strand 7	A	462	469	anti-parallel
Strand 8	A	474	476	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	429	430	first strand
Strand 2	A	435	436	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	438	439	first strand
Strand 2	A	443	444	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	504	507	first strand
Strand 2	A	515	518	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	524	525	first strand
Strand 2	A	536	537	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	35	36	first strand
Strand 2	B	95	96	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	99	101	first strand
Strand 2	B	38	41	parallel
Strand 3	B	141	142	parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	241	243	first strand
Strand 2	B	212	214	parallel
Strand 3	B	273	274	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	322	326	first strand
Strand 2	B	454	461	anti-parallel
Strand 3	B	466	474	anti-parallel
Strand 4	B	479	480	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	434	437	first strand
Strand 2	B	440	443	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	507	511	first strand
Strand 2	B	519	523	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9UTC

Analysis of interatomic Contacts of Structural Units in PDB entry:
9UTC