Analysis of interatomic Contacts of Structural Units in PDB entry:
9UTD


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9UTD entry

There is 1 chain in PDB entry 9UTD (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 41LYS 468
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 25 helices in PDB entry 9UTD. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
47 57Right-handed alpha
Helix 2
AA2
A
61 65Right-handed 310
Helix 3
AA3
A
66 75Right-handed alpha
Helix 4
AA4
A
75 111Right-handed alpha
Helix 5
AA5
A
121 130Right-handed alpha
Helix 6
AA6
A
131 161Right-handed alpha
Helix 7
AA7
A
162 164Right-handed 310
Helix 8
AA8
A
169 182Right-handed alpha
Helix 9
AA9
A
193 219Right-handed alpha
Helix 10
AB1
A
231 246Right-handed alpha
Helix 11
AB2
A
248 253Right-handed alpha
Helix 12
AB3
A
266 275Right-handed 310
Helix 13
AB4
A
276 292Right-handed alpha
Helix 14
AB5
A
293 295Right-handed 310
Helix 15
AB6
A
300 304Right-handed 310
Helix 16
AB7
A
308 323Right-handed alpha
Helix 17
AB8
A
323 342Right-handed alpha
Helix 18
AB9
A
348 356Right-handed alpha
Helix 19
AC1
A
360 370Right-handed alpha
Helix 20
AC2
A
374 384Right-handed alpha
Helix 21
AC3
A
384 389Right-handed alpha
Helix 22
AC4
A
390 401Right-handed alpha
Helix 23
AC5
A
403 409Right-handed alpha
Helix 24
AC6
A
420 438Right-handed alpha
Helix 25
AC7
A
440 459Right-handed alpha
Back to top of page
There are no sheets in PDB entry 9UTD
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il