Analysis of interatomic Contacts of Structural Units in PDB entry:
9UTW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9UTW entry

There are 5 chains in PDB entry 9UTW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
C	ALA 92	VAL 116
G	ALA 92	VAL 116
H	PRO 144	HIS 1826
B	PRO 144	HIS 1826
A	C 4	C 68

There are148 helices in PDB entry 9UTW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	C	104	116	Right-handed alpha
Helix 2	AA2	G	104	116	Right-handed alpha
Helix 3	AA3	H	161	176	Right-handed alpha
Helix 4	AA4	H	178	197	Right-handed alpha
Helix 5	AA5	H	201	214	Right-handed alpha
Helix 6	AA6	H	219	229	Right-handed alpha
Helix 7	AA7	H	232	247	Right-handed alpha
Helix 8	AA8	H	281	294	Right-handed alpha
Helix 9	AA9	H	297	313	Right-handed alpha
Helix 10	AB1	H	315	320	Right-handed 310
Helix 11	AB2	H	321	337	Right-handed alpha
Helix 12	AB3	H	338	343	Right-handed alpha
Helix 13	AB4	H	351	356	Right-handed alpha
Helix 14	AB5	H	357	369	Right-handed alpha
Helix 15	AB6	H	383	387	Right-handed 310
Helix 16	AB7	H	389	396	Right-handed alpha
Helix 17	AB8	H	399	404	Right-handed alpha
Helix 18	AB9	H	418	422	Right-handed 310
Helix 19	AC1	H	425	429	Right-handed 310
Helix 20	AC2	H	443	452	Right-handed alpha
Helix 21	AC3	H	452	470	Right-handed alpha
Helix 22	AC4	H	471	476	Right-handed 310
Helix 23	AC5	H	488	497	Right-handed alpha
Helix 24	AC6	H	498	516	Right-handed alpha
Helix 25	AC7	H	525	551	Right-handed alpha
Helix 26	AC8	H	559	583	Right-handed alpha
Helix 27	AC9	H	603	608	Right-handed alpha
Helix 28	AD1	H	616	654	Right-handed alpha
Helix 29	AD2	H	665	669	Right-handed 310
Helix 30	AD3	H	671	688	Right-handed alpha
Helix 31	AD4	H	690	712	Right-handed alpha
Helix 32	AD5	H	719	724	Right-handed alpha
Helix 33	AD6	H	725	734	Right-handed alpha
Helix 34	AD7	H	745	764	Right-handed alpha
Helix 35	AD8	H	768	773	Right-handed alpha
Helix 36	AD9	H	785	789	Right-handed 310
Helix 37	AE1	H	815	827	Right-handed alpha
Helix 38	AE2	H	835	839	Right-handed 310
Helix 39	AE3	H	856	862	Right-handed alpha
Helix 40	AE4	H	872	880	Right-handed alpha
Helix 41	AE5	H	880	895	Right-handed alpha
Helix 42	AE6	H	932	946	Right-handed alpha
Helix 43	AE7	H	949	958	Right-handed alpha
Helix 44	AE8	H	958	972	Right-handed alpha
Helix 45	AE9	H	972	980	Right-handed alpha
Helix 46	AF1	H	982	996	Right-handed alpha
Helix 47	AF2	H	1006	1010	Right-handed 310
Helix 48	AF3	H	1011	1025	Right-handed alpha
Helix 49	AF4	H	1082	1090	Right-handed alpha
Helix 50	AF5	H	1108	1113	Right-handed alpha
Helix 51	AF6	H	1114	1120	Right-handed alpha
Helix 52	AF7	H	1121	1123	Right-handed 310
Helix 53	AF8	H	1201	1205	Right-handed alpha
Helix 54	AF9	H	1222	1233	Right-handed alpha
Helix 55	AG1	H	1268	1271	Right-handed 310
Helix 56	AG2	H	1272	1280	Right-handed alpha
Helix 57	AG3	H	1283	1292	Right-handed alpha
Helix 58	AG4	H	1295	1325	Right-handed alpha
Helix 59	AG5	H	1348	1378	Right-handed alpha
Helix 60	AG6	H	1437	1446	Right-handed alpha
Helix 61	AG7	H	1450	1467	Right-handed alpha
Helix 62	AG8	H	1471	1489	Right-handed alpha
Helix 63	AG9	H	1495	1511	Right-handed alpha
Helix 64	AH1	H	1556	1562	Right-handed alpha
Helix 65	AH2	H	1564	1584	Right-handed alpha
Helix 66	AH3	H	1598	1622	Right-handed alpha
Helix 67	AH4	H	1627	1635	Right-handed alpha
Helix 68	AH5	H	1637	1662	Right-handed alpha
Helix 69	AH6	H	1670	1696	Right-handed alpha
Helix 70	AH7	H	1723	1753	Right-handed alpha
Helix 71	AH8	H	1754	1760	Right-handed alpha
Helix 72	AH9	H	1762	1774	Right-handed alpha
Helix 73	AI1	H	1786	1825	Right-handed alpha
Helix 74	AI2	B	160	176	Right-handed alpha
Helix 75	AI3	B	178	198	Right-handed alpha
Helix 76	AI4	B	201	214	Right-handed alpha
Helix 77	AI5	B	219	229	Right-handed alpha
Helix 78	AI6	B	232	247	Right-handed alpha
Helix 79	AI7	B	281	294	Right-handed alpha
Helix 80	AI8	B	297	315	Right-handed alpha
Helix 81	AI9	B	317	320	Right-handed 310
Helix 82	AJ1	B	321	337	Right-handed alpha
Helix 83	AJ2	B	351	357	Right-handed alpha
Helix 84	AJ3	B	357	367	Right-handed alpha
Helix 85	AJ4	B	383	387	Right-handed 310
Helix 86	AJ5	B	389	395	Right-handed alpha
Helix 87	AJ6	B	396	398	Right-handed 310
Helix 88	AJ7	B	399	404	Right-handed alpha
Helix 89	AJ8	B	413	417	Right-handed 310
Helix 90	AJ9	B	418	420	Right-handed 310
Helix 91	AK1	B	421	426	Right-handed alpha
Helix 92	AK2	B	443	452	Right-handed alpha
Helix 93	AK3	B	452	470	Right-handed alpha
Helix 94	AK4	B	471	476	Right-handed 310
Helix 95	AK5	B	488	497	Right-handed alpha
Helix 96	AK6	B	498	515	Right-handed alpha
Helix 97	AK7	B	524	542	Right-handed alpha
Helix 98	AK8	B	543	551	Right-handed alpha
Helix 99	AK9	B	551	556	Right-handed alpha
Helix 100	AL1	B	559	583	Right-handed alpha
Helix 101	AL2	B	589	594	Right-handed alpha
Helix 102	AL3	B	603	608	Right-handed alpha
Helix 103	AL4	B	615	641	Right-handed alpha
Helix 104	AL5	B	644	652	Right-handed alpha
Helix 105	AL6	B	671	688	Right-handed alpha
Helix 106	AL7	B	690	712	Right-handed alpha
Helix 107	AL8	B	719	724	Right-handed alpha
Helix 108	AL9	B	725	734	Right-handed alpha
Helix 109	AM1	B	745	764	Right-handed alpha
Helix 110	AM2	B	768	773	Right-handed alpha
Helix 111	AM3	B	785	790	Right-handed 310
Helix 112	AM4	B	815	826	Right-handed alpha
Helix 113	AM5	B	857	862	Right-handed alpha
Helix 114	AM6	B	872	880	Right-handed alpha
Helix 115	AM7	B	880	895	Right-handed alpha
Helix 116	AM8	B	932	945	Right-handed alpha
Helix 117	AM9	B	949	958	Right-handed alpha
Helix 118	AN1	B	958	972	Right-handed alpha
Helix 119	AN2	B	972	980	Right-handed alpha
Helix 120	AN3	B	982	996	Right-handed alpha
Helix 121	AN4	B	1006	1010	Right-handed 310
Helix 122	AN5	B	1011	1025	Right-handed alpha
Helix 123	AN6	B	1082	1090	Right-handed alpha
Helix 124	AN7	B	1091	1093	Right-handed 310
Helix 125	AN8	B	1108	1113	Right-handed alpha
Helix 126	AN9	B	1114	1120	Right-handed alpha
Helix 127	AO1	B	1121	1123	Right-handed 310
Helix 128	AO2	B	1201	1206	Right-handed alpha
Helix 129	AO3	B	1222	1233	Right-handed alpha
Helix 130	AO4	B	1268	1271	Right-handed 310
Helix 131	AO5	B	1272	1280	Right-handed alpha
Helix 132	AO6	B	1283	1292	Right-handed alpha
Helix 133	AO7	B	1294	1325	Right-handed alpha
Helix 134	AO8	B	1348	1378	Right-handed alpha
Helix 135	AO9	B	1437	1446	Right-handed alpha
Helix 136	AP1	B	1450	1467	Right-handed alpha
Helix 137	AP2	B	1471	1489	Right-handed alpha
Helix 138	AP3	B	1495	1511	Right-handed alpha
Helix 139	AP4	B	1556	1562	Right-handed alpha
Helix 140	AP5	B	1565	1583	Right-handed alpha
Helix 141	AP6	B	1598	1623	Right-handed alpha
Helix 142	AP7	B	1627	1635	Right-handed alpha
Helix 143	AP8	B	1637	1663	Right-handed alpha
Helix 144	AP9	B	1672	1696	Right-handed alpha
Helix 145	AQ1	B	1723	1753	Right-handed alpha
Helix 146	AQ2	B	1754	1760	Right-handed alpha
Helix 147	AQ3	B	1762	1774	Right-handed alpha
Helix 148	AQ4	B	1786	1825	Right-handed alpha

There are 7 sheets in PDB entry 9UTW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	370	373	first strand
Strand 2	H	376	379	anti-parallel

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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	1068	1072	first strand
Strand 2	H	1046	1053	anti-parallel
Strand 3	H	1029	1036	anti-parallel
Strand 4	H	999	1004	parallel
Strand 5	H	842	848	parallel
Strand 6	H	1097	1100	parallel
Strand 7	H	1198	1200	anti-parallel
Strand 8	H	1148	1153	anti-parallel
Strand 9	H	1235	1239	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	1327	1328	first strand
Strand 2	H	1346	1347	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	370	373	first strand
Strand 2	B	376	379	anti-parallel

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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1068	1071	first strand
Strand 2	B	1046	1053	anti-parallel
Strand 3	B	1029	1036	anti-parallel
Strand 4	B	998	1004	parallel
Strand 5	B	842	848	parallel
Strand 6	B	1097	1100	parallel
Strand 7	B	1198	1200	anti-parallel
Strand 8	B	1148	1153	anti-parallel
Strand 9	B	1235	1239	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1105	1106	first strand
Strand 2	B	1245	1246	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1327	1328	first strand
Strand 2	B	1346	1347	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9UTW

Analysis of interatomic Contacts of Structural Units in PDB entry:
9UTW