Analysis of interatomic Contacts of Structural Units in PDB entry:
9UU0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9UU0 entry

There are 2 chains in PDB entry 9UU0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	ARG 590
B	MET 1	ARG 590

There are 57 helices in PDB entry 9UU0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	17	33	Right-handed alpha
Helix 2	AA2	A	43	54	Right-handed alpha
Helix 3	AA3	A	65	74	Right-handed alpha
Helix 4	AA4	A	83	88	Right-handed alpha
Helix 5	AA5	A	91	96	Right-handed alpha
Helix 6	AA6	A	129	131	Right-handed 310
Helix 7	AA7	A	132	144	Right-handed alpha
Helix 8	AA8	A	154	165	Right-handed alpha
Helix 9	AA9	A	186	202	Right-handed alpha
Helix 10	AB1	A	210	220	Right-handed alpha
Helix 11	AB2	A	229	231	Right-handed 310
Helix 12	AB3	A	232	239	Right-handed alpha
Helix 13	AB4	A	273	284	Right-handed alpha
Helix 14	AB5	A	287	298	Right-handed alpha
Helix 15	AB6	A	305	313	Right-handed alpha
Helix 16	AB7	A	315	328	Right-handed alpha
Helix 17	AB8	A	336	354	Right-handed alpha
Helix 18	AB9	A	357	374	Right-handed alpha
Helix 19	AC1	A	375	377	Right-handed 310
Helix 20	AC2	A	384	396	Right-handed alpha
Helix 21	AC3	A	396	403	Right-handed alpha
Helix 22	AC4	A	412	422	Right-handed alpha
Helix 23	AC5	A	423	426	Right-handed 310
Helix 24	AC6	A	433	451	Right-handed alpha
Helix 25	AC7	A	452	463	Right-handed alpha
Helix 26	AC8	A	478	499	Right-handed alpha
Helix 27	AC9	A	504	519	Right-handed alpha
Helix 28	AD1	A	528	530	Right-handed 310
Helix 29	AD2	A	540	553	Right-handed alpha
Helix 30	AD3	A	560	586	Right-handed alpha
Helix 31	AD4	B	18	33	Right-handed alpha
Helix 32	AD5	B	43	52	Right-handed alpha
Helix 33	AD6	B	65	75	Right-handed alpha
Helix 34	AD7	B	83	88	Right-handed alpha
Helix 35	AD8	B	91	98	Right-handed alpha
Helix 36	AD9	B	129	131	Right-handed 310
Helix 37	AE1	B	132	143	Right-handed alpha
Helix 38	AE2	B	154	166	Right-handed alpha
Helix 39	AE3	B	186	202	Right-handed alpha
Helix 40	AE4	B	210	220	Right-handed alpha
Helix 41	AE5	B	229	231	Right-handed 310
Helix 42	AE6	B	232	238	Right-handed alpha
Helix 43	AE7	B	273	284	Right-handed alpha
Helix 44	AE8	B	287	298	Right-handed alpha
Helix 45	AE9	B	305	313	Right-handed alpha
Helix 46	AF1	B	315	328	Right-handed alpha
Helix 47	AF2	B	336	353	Right-handed alpha
Helix 48	AF3	B	357	374	Right-handed alpha
Helix 49	AF4	B	384	396	Right-handed alpha
Helix 50	AF5	B	396	403	Right-handed alpha
Helix 51	AF6	B	412	422	Right-handed alpha
Helix 52	AF7	B	433	451	Right-handed alpha
Helix 53	AF8	B	452	463	Right-handed alpha
Helix 54	AF9	B	478	499	Right-handed alpha
Helix 55	AG1	B	508	519	Right-handed alpha
Helix 56	AG2	B	540	553	Right-handed alpha
Helix 57	AG3	B	560	583	Right-handed alpha

There are 12 sheets in PDB entry 9UU0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	35	39	first strand
Strand 2	A	7	11	parallel
Strand 3	A	60	64	parallel
Strand 4	A	259	267	anti-parallel
Strand 5	A	106	112	anti-parallel
Strand 6	A	302	303	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	35	39	first strand
Strand 2	A	7	11	parallel
Strand 3	A	60	64	parallel
Strand 4	A	259	267	anti-parallel
Strand 5	A	329	330	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	99	100	first strand
Strand 2	A	103	104	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	146	148	first strand
Strand 2	A	223	228	parallel
Strand 3	A	115	118	anti-parallel
Strand 4	A	244	246	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	171	173	first strand
Strand 2	A	176	178	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	475	476	first strand
Strand 2	A	532	537	anti-parallel
Strand 3	A	521	526	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	35	39	first strand
Strand 2	B	7	11	parallel
Strand 3	B	60	64	parallel
Strand 4	B	259	267	anti-parallel
Strand 5	B	106	112	anti-parallel
Strand 6	B	302	303	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	35	39	first strand
Strand 2	B	7	11	parallel
Strand 3	B	60	64	parallel
Strand 4	B	259	267	anti-parallel
Strand 5	B	329	330	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	99	100	first strand
Strand 2	B	103	104	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	146	148	first strand
Strand 2	B	223	228	parallel
Strand 3	B	115	119	anti-parallel
Strand 4	B	243	246	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	171	173	first strand
Strand 2	B	176	178	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	475	476	first strand
Strand 2	B	532	537	anti-parallel
Strand 3	B	521	526	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9UU0

Analysis of interatomic Contacts of Structural Units in PDB entry:
9UU0