Analysis of interatomic Contacts of Structural Units in PDB entry:
9UU7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9UU7 entry

There are 2 chains in PDB entry 9UU7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
GLY 126SER 355
A
GLY 126LYS 357
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 9UU7. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
B
134 145Right-handed alpha
Helix 2
AA2
B
152 164Right-handed alpha
Helix 3
AA3
B
177 191Right-handed alpha
Helix 4
AA4
B
212 230Right-handed alpha
Helix 5
AA5
B
243 251Right-handed alpha
Helix 6
AA6
B
262 272Right-handed alpha
Helix 7
AA7
B
287 292Right-handed alpha
Helix 8
AA8
B
296 307Right-handed alpha
Helix 9
AA9
B
314 318Right-handed 310
Helix 10
AB1
B
336 345Right-handed alpha
Helix 11
AB2
A
128 132Right-handed 310
Helix 12
AB3
A
134 144Right-handed alpha
Helix 13
AB4
A
152 164Right-handed alpha
Helix 14
AB5
A
177 193Right-handed alpha
Helix 15
AB6
A
212 230Right-handed alpha
Helix 16
AB7
A
243 251Right-handed alpha
Helix 17
AB8
A
262 272Right-handed alpha
Helix 18
AB9
A
287 292Right-handed alpha
Helix 19
AC1
A
296 307Right-handed alpha
Helix 20
AC2
A
312 316Right-handed 310
Helix 21
AC3
A
336 345Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9UU7.

There are 14 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
234 236first strand
Strand 2
B
258 261parallel
Strand 3
B
206 209parallel
Strand 4
B
282 286parallel
Strand 5
B
325 330parallel
Strand 6
B
167 171parallel
Strand 7
A
350 356anti-parallel
Strand 8
B
350 354anti-parallel
Strand 9
A
167 171anti-parallel
Strand 10
A
325 330parallel
Strand 11
A
282 286parallel
Strand 12
A
206 209parallel
Strand 13
A
258 261parallel
Strand 14
A
234 237parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il