Analysis of interatomic Contacts of Structural Units in PDB entry:
9UUF

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9UUF entry

There are 4 chains in PDB entry 9UUF (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	CYS 383	PRO 586
D	CYS 383	SER 583
A	GLU 1	SER 121
C	GLU 1	SER 121

There are 5 helices in PDB entry 9UUF. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	385	390	Right-handed alpha
Helix 2	AA2	B	411	417	Right-handed alpha
Helix 3	AA3	B	462	468	Right-handed alpha
Helix 4	AA4	B	524	529	Right-handed 310
Helix 5	AA5	D	464	468	Right-handed alpha

There are 9 sheets in PDB entry 9UUF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	400	404	first strand
Strand 2	B	440	447	anti-parallel
Strand 3	B	568	576	anti-parallel
Strand 4	B	477	483	anti-parallel
Strand 5	B	424	425	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	496	503	first strand
Strand 2	B	556	562	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	400	403	first strand
Strand 2	D	442	448	anti-parallel
Strand 3	D	569	574	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	514	515	first strand
Strand 2	D	497	505	anti-parallel
Strand 3	D	554	561	anti-parallel
Strand 4	D	540	541	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	6	7	first strand
Strand 2	A	17	22	anti-parallel
Strand 3	A	77	83	anti-parallel
Strand 4	A	71	72	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	58	59	first strand
Strand 2	A	46	51	anti-parallel
Strand 3	A	30	39	anti-parallel
Strand 4	A	91	100	anti-parallel
Strand 5	A	107	111	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	58	59	first strand
Strand 2	A	46	51	anti-parallel
Strand 3	A	30	39	anti-parallel
Strand 4	A	91	100	anti-parallel
Strand 5	A	115	117	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	30	31	first strand
Strand 2	C	99	100	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	71	72	first strand
Strand 2	C	77	78	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9UUF

Analysis of interatomic Contacts of Structural Units in PDB entry:
9UUF