Analysis of interatomic Contacts of Structural Units in PDB entry:
9UUM

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9UUM entry

There are 8 chains in PDB entry 9UUM (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
C	ASN 45	THR 425
D	ALA 2	MET 147
I	GLU 143	SER 197
N	MET 1	GLY 76
U	MET 1	GLY 76
R	LYS 19	GLN 104
B	MET 1	HIS 1140
A	LYS 42	ALA 759

There are 64 helices in PDB entry 9UUM. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	C	53	57	Right-handed 310
Helix 2	AA2	C	103	115	Right-handed alpha
Helix 3	AA3	C	200	204	Right-handed 310
Helix 4	AA4	C	220	232	Right-handed alpha
Helix 5	AA5	C	233	238	Right-handed 310
Helix 6	AA6	C	241	247	Right-handed alpha
Helix 7	AA7	C	250	265	Right-handed alpha
Helix 8	AA8	C	276	286	Right-handed alpha
Helix 9	AA9	C	291	301	Right-handed alpha
Helix 10	AB1	C	303	317	Right-handed alpha
Helix 11	AB2	C	333	337	Right-handed 310
Helix 12	AB3	D	3	16	Right-handed alpha
Helix 13	AB4	D	86	91	Right-handed alpha
Helix 14	AB5	D	98	112	Right-handed alpha
Helix 15	AB6	D	120	130	Right-handed alpha
Helix 16	AB7	D	131	145	Right-handed alpha
Helix 17	AB8	I	157	168	Right-handed alpha
Helix 18	AB9	I	186	197	Right-handed alpha
Helix 19	AC1	N	22	34	Right-handed alpha
Helix 20	AC2	N	37	39	Right-handed 310
Helix 21	AC3	U	22	35	Right-handed alpha
Helix 22	AC4	U	56	60	Right-handed 310
Helix 23	AC5	R	80	91	Right-handed alpha
Helix 24	AC6	B	252	256	Right-handed 310
Helix 25	AC7	B	366	370	Right-handed 310
Helix 26	AC8	B	987	990	Right-handed 310
Helix 27	AC9	B	1044	1062	Right-handed alpha
Helix 28	AD1	B	1069	1074	Right-handed alpha
Helix 29	AD2	B	1091	1096	Right-handed alpha
Helix 30	AD3	B	1097	1100	Right-handed 310
Helix 31	AD4	B	1101	1109	Right-handed alpha
Helix 32	AD5	B	1125	1138	Right-handed alpha
Helix 33	AD6	A	57	75	Right-handed alpha
Helix 34	AD7	A	82	95	Right-handed alpha
Helix 35	AD8	A	98	117	Right-handed alpha
Helix 36	AD9	A	118	123	Right-handed 310
Helix 37	AE1	A	127	153	Right-handed alpha
Helix 38	AE2	A	153	161	Right-handed alpha
Helix 39	AE3	A	169	182	Right-handed alpha
Helix 40	AE4	A	185	205	Right-handed alpha
Helix 41	AE5	A	210	224	Right-handed alpha
Helix 42	AE6	A	226	245	Right-handed alpha
Helix 43	AE7	A	245	252	Right-handed alpha
Helix 44	AE8	A	255	277	Right-handed alpha
Helix 45	AE9	A	279	281	Right-handed 310
Helix 46	AF1	A	282	295	Right-handed alpha
Helix 47	AF2	A	299	313	Right-handed alpha
Helix 48	AF3	A	315	329	Right-handed alpha
Helix 49	AF4	A	331	354	Right-handed alpha
Helix 50	AF5	A	355	359	Right-handed 310
Helix 51	AF6	A	360	379	Right-handed alpha
Helix 52	AF7	A	383	399	Right-handed alpha
Helix 53	AF8	A	403	417	Right-handed alpha
Helix 54	AF9	A	425	441	Right-handed alpha
Helix 55	AG1	A	445	464	Right-handed alpha
Helix 56	AG2	A	468	484	Right-handed alpha
Helix 57	AG3	A	488	515	Right-handed alpha
Helix 58	AG4	A	544	562	Right-handed alpha
Helix 59	AG5	A	592	603	Right-handed alpha
Helix 60	AG6	A	609	617	Right-handed alpha
Helix 61	AG7	A	620	634	Right-handed alpha
Helix 62	AG8	A	693	708	Right-handed alpha
Helix 63	AG9	A	711	723	Right-handed alpha
Helix 64	AH1	A	728	742	Right-handed alpha

There are 37 sheets in PDB entry 9UUM. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	78	82	first strand
Strand 2	C	179	184	anti-parallel
Strand 3	C	156	167	anti-parallel
Strand 4	C	96	100	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	78	82	first strand
Strand 2	C	179	184	anti-parallel
Strand 3	C	156	167	anti-parallel
Strand 4	C	135	143	anti-parallel
Strand 5	C	119	123	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	321	322	first strand
Strand 2	C	423	424	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	359	362	first strand
Strand 2	C	415	418	anti-parallel
Strand 3	C	397	404	anti-parallel
Strand 4	C	384	391	anti-parallel
Strand 5	C	368	370	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	21	25	first strand
Strand 2	D	32	38	anti-parallel
Strand 3	D	49	55	anti-parallel
Strand 4	D	66	69	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	146	147	first strand
Strand 2	I	154	155	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	12	13	first strand
Strand 2	N	4	6	anti-parallel
Strand 3	N	66	71	parallel
Strand 4	N	41	45	anti-parallel
Strand 5	N	48	49	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	12	16	first strand
Strand 2	U	2	6	anti-parallel
Strand 3	U	65	71	parallel
Strand 4	U	41	44	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	522	523	first strand
Strand 2	R	26	33	parallel
Strand 3	A	526	529	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	522	523	first strand
Strand 2	R	26	33	parallel
Strand 3	A	568	578	anti-parallel
Strand 4	A	589	591	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	71	72	first strand
Strand 2	R	78	79	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1007	1009	first strand
Strand 2	B	1028	1030	anti-parallel
Strand 3	B	1037	1042	anti-parallel
Strand 4	B	4	10	anti-parallel
Strand 5	B	1088	1090	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	15	21	first strand
Strand 2	B	30	35	anti-parallel
Strand 3	B	38	43	anti-parallel
Strand 4	B	50	56	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	63	67	first strand
Strand 2	B	76	80	anti-parallel
Strand 3	B	85	94	anti-parallel
Strand 4	B	97	107	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	121	124	first strand
Strand 2	B	130	134	anti-parallel
Strand 3	B	139	144	anti-parallel
Strand 4	B	155	158	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	163	169	first strand
Strand 2	B	177	184	anti-parallel
Strand 3	B	187	196	anti-parallel
Strand 4	B	201	204	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	163	169	first strand
Strand 2	B	177	184	anti-parallel
Strand 3	B	187	196	anti-parallel
Strand 4	B	210	211	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	218	221	first strand
Strand 2	B	229	232	anti-parallel
Strand 3	B	237	240	anti-parallel
Strand 4	B	245	248	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	258	263	first strand
Strand 2	B	270	275	anti-parallel
Strand 3	B	279	287	anti-parallel
Strand 4	B	297	307	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	313	318	first strand
Strand 2	B	321	325	anti-parallel
Strand 3	B	331	336	anti-parallel
Strand 4	B	347	353	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	359	365	first strand
Strand 2	B	374	379	anti-parallel
Strand 3	B	386	391	anti-parallel
Strand 4	B	711	712	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	359	365	first strand
Strand 2	B	374	379	anti-parallel
Strand 3	B	386	391	anti-parallel
Strand 4	B	715	716	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	396	403	first strand
Strand 2	B	698	704	anti-parallel
Strand 3	B	690	694	anti-parallel
Strand 4	B	681	682	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	411	413	first strand
Strand 2	B	424	429	anti-parallel
Strand 3	B	432	439	anti-parallel
Strand 4	B	442	445	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	457	463	first strand
Strand 2	B	467	472	anti-parallel
Strand 3	B	476	480	anti-parallel
Strand 4	B	486	490	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	500	503	first strand
Strand 2	B	507	512	anti-parallel
Strand 3	B	515	522	anti-parallel
Strand 4	B	525	533	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	538	542	first strand
Strand 2	B	555	560	anti-parallel
Strand 3	B	565	570	anti-parallel
Strand 4	B	578	581	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	591	595	first strand
Strand 2	B	600	605	anti-parallel
Strand 3	B	610	615	anti-parallel
Strand 4	B	624	630	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	639	642	first strand
Strand 2	B	647	651	anti-parallel
Strand 3	B	657	661	anti-parallel
Strand 4	B	666	670	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	720	727	first strand
Strand 2	B	732	741	anti-parallel
Strand 3	B	786	795	anti-parallel
Strand 4	B	801	806	anti-parallel
Strand 5	B	764	765	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	811	819	first strand
Strand 2	B	828	835	anti-parallel
Strand 3	B	846	854	anti-parallel
Strand 4	B	857	866	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	874	875	first strand
Strand 2	B	880	881	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	913	917	first strand
Strand 2	B	920	924	anti-parallel
Strand 3	B	932	936	anti-parallel
Strand 4	B	941	946	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	957	961	first strand
Strand 2	B	964	968	anti-parallel
Strand 3	B	974	979	anti-parallel
Strand 4	B	992	998	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1075	1078	first strand
Strand 2	B	1081	1084	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	640	641	first strand
Strand 2	A	654	655	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	746	747	first strand
Strand 2	A	755	756	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9UUM

Analysis of interatomic Contacts of Structural Units in PDB entry:
9UUM