Analysis of interatomic Contacts of Structural Units in PDB entry:
9UUO

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9UUO entry

There are 5 chains in PDB entry 9UUO (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 106	GLU 708
B	PHE 18	PRO 603
C	SER 9	LEU 105
F	LEU 11	SER 110
E	GLY 175	GLU 244

There are 46 helices in PDB entry 9UUO. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	121	127	Right-handed alpha
Helix 2	AA2	A	127	139	Right-handed alpha
Helix 3	AA3	A	140	142	Right-handed 310
Helix 4	AA4	A	153	166	Right-handed alpha
Helix 5	AA5	A	189	193	Right-handed 310
Helix 6	AA6	A	194	199	Right-handed 310
Helix 7	AA7	A	202	207	Right-handed alpha
Helix 8	AA8	A	214	233	Right-handed alpha
Helix 9	AA9	A	291	296	Right-handed alpha
Helix 10	AB1	A	312	323	Right-handed alpha
Helix 11	AB2	A	349	361	Right-handed alpha
Helix 12	AB3	A	423	426	Right-handed 310
Helix 13	AB4	A	429	446	Right-handed alpha
Helix 14	AB5	A	456	485	Right-handed alpha
Helix 15	AB6	A	498	507	Right-handed alpha
Helix 16	AB7	A	509	518	Right-handed alpha
Helix 17	AB8	A	545	558	Right-handed alpha
Helix 18	AB9	A	615	625	Right-handed alpha
Helix 19	AC1	A	665	669	Right-handed 310
Helix 20	AC2	A	678	693	Right-handed alpha
Helix 21	AC3	B	113	120	Right-handed alpha
Helix 22	AC4	B	161	175	Right-handed alpha
Helix 23	AC5	B	176	179	Right-handed 310
Helix 24	AC6	B	188	202	Right-handed alpha
Helix 25	AC7	B	208	229	Right-handed alpha
Helix 26	AC8	B	234	252	Right-handed alpha
Helix 27	AC9	B	291	296	Right-handed alpha
Helix 28	AD1	B	307	313	Right-handed alpha
Helix 29	AD2	B	341	347	Right-handed alpha
Helix 30	AD3	B	368	374	Right-handed alpha
Helix 31	AD4	B	399	406	Right-handed alpha
Helix 32	AD5	B	416	421	Right-handed alpha
Helix 33	AD6	B	446	466	Right-handed alpha
Helix 34	AD7	B	496	511	Right-handed alpha
Helix 35	AD8	B	515	534	Right-handed alpha
Helix 36	AD9	B	551	602	Right-handed alpha
Helix 37	AE1	C	12	17	Right-handed alpha
Helix 38	AE2	C	17	41	Right-handed alpha
Helix 39	AE3	C	46	97	Right-handed alpha
Helix 40	AE4	C	98	102	Right-handed 310
Helix 41	AE5	F	12	52	Right-handed alpha
Helix 42	AE6	F	93	98	Right-handed alpha
Helix 43	AE7	F	99	110	Right-handed alpha
Helix 44	AE8	E	178	189	Right-handed alpha
Helix 45	AE9	E	190	204	Right-handed alpha
Helix 46	AF1	E	228	244	Right-handed alpha

There are 11 sheets in PDB entry 9UUO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	108	111	first strand
Strand 2	A	115	119	anti-parallel
Strand 3	E	219	222	anti-parallel
Strand 4	E	211	214	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	275	276	first strand
Strand 2	A	280	282	anti-parallel
Strand 3	B	91	93	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	301	302	first strand
Strand 2	A	309	310	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	331	336	first strand
Strand 2	A	339	343	anti-parallel
Strand 3	A	379	386	anti-parallel
Strand 4	A	396	405	anti-parallel
Strand 5	A	418	421	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	493	494	first strand
Strand 2	A	696	697	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	496	497	first strand
Strand 2	B	31	34	anti-parallel
Strand 3	A	539	542	parallel
Strand 4	A	523	525	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	584	586	first strand
Strand 2	B	299	301	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	281	282	first strand
Strand 2	B	289	290	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	339	340	first strand
Strand 2	B	330	333	anti-parallel
Strand 3	B	360	362	parallel
Strand 4	B	351	352	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	387	388	first strand
Strand 2	B	397	398	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	410	411	first strand
Strand 2	B	432	433	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9UUO

Analysis of interatomic Contacts of Structural Units in PDB entry:
9UUO