Analysis of interatomic Contacts of Structural Units in PDB entry:
9UUZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9UUZ entry

There are 4 chains in PDB entry 9UUZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 79	ASN 295
B	MSE 82	LEU 297
C	GLY 77	LYS 294
D	MSE 82	GLY 296

There are 31 helices in PDB entry 9UUZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	100	104	Right-handed 310
Helix 2	AA2	A	131	141	Right-handed alpha
Helix 3	AA3	A	142	155	Right-handed alpha
Helix 4	AA4	A	206	224	Right-handed alpha
Helix 5	AA5	A	247	263	Right-handed alpha
Helix 6	AA6	A	279	284	Right-handed 310
Helix 7	AA7	A	286	292	Right-handed 310
Helix 8	AA8	B	100	104	Right-handed 310
Helix 9	AA9	B	131	141	Right-handed alpha
Helix 10	AB1	B	142	156	Right-handed alpha
Helix 11	AB2	B	206	224	Right-handed alpha
Helix 12	AB3	B	247	262	Right-handed alpha
Helix 13	AB4	B	279	283	Right-handed 310
Helix 14	AB5	B	285	290	Right-handed alpha
Helix 15	AB6	B	291	295	Right-handed 310
Helix 16	AB7	C	100	104	Right-handed 310
Helix 17	AB8	C	131	141	Right-handed alpha
Helix 18	AB9	C	142	156	Right-handed alpha
Helix 19	AC1	C	206	223	Right-handed alpha
Helix 20	AC2	C	247	262	Right-handed alpha
Helix 21	AC3	C	277	282	Right-handed alpha
Helix 22	AC4	C	283	284	Right-handed 310
Helix 23	AC5	C	285	293	Right-handed 310
Helix 24	AC6	D	100	104	Right-handed 310
Helix 25	AC7	D	131	141	Right-handed alpha
Helix 26	AC8	D	142	155	Right-handed alpha
Helix 27	AC9	D	206	222	Right-handed alpha
Helix 28	AD1	D	247	263	Right-handed alpha
Helix 29	AD2	D	279	283	Right-handed 310
Helix 30	AD3	D	285	290	Right-handed alpha
Helix 31	AD4	D	291	293	Right-handed 310

There are 12 sheets in PDB entry 9UUZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	85	89	first strand
Strand 2	A	92	98	anti-parallel
Strand 3	A	271	276	parallel
Strand 4	A	229	232	parallel
Strand 5	A	109	115	parallel
Strand 6	A	188	196	parallel
Strand 7	A	182	185	anti-parallel

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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	85	89	first strand
Strand 2	A	92	98	anti-parallel
Strand 3	A	271	276	parallel
Strand 4	A	229	232	parallel
Strand 5	A	109	115	parallel
Strand 6	A	188	196	parallel
Strand 7	A	202	205	anti-parallel
Strand 8	A	239	240	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	161	163	first strand
Strand 2	A	176	177	anti-parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	84	89	first strand
Strand 2	B	92	98	anti-parallel
Strand 3	B	271	276	parallel
Strand 4	B	229	232	parallel
Strand 5	B	109	115	parallel
Strand 6	B	188	196	parallel
Strand 7	B	182	185	anti-parallel

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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	84	89	first strand
Strand 2	B	92	98	anti-parallel
Strand 3	B	271	276	parallel
Strand 4	B	229	232	parallel
Strand 5	B	109	115	parallel
Strand 6	B	188	196	parallel
Strand 7	B	202	205	anti-parallel
Strand 8	B	239	241	parallel
Strand 9	B	244	245	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	161	163	first strand
Strand 2	B	176	177	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	85	89	first strand
Strand 2	C	92	98	anti-parallel
Strand 3	C	271	276	parallel
Strand 4	C	229	232	parallel
Strand 5	C	109	115	parallel
Strand 6	C	188	196	parallel
Strand 7	C	182	185	anti-parallel

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There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	85	89	first strand
Strand 2	C	92	98	anti-parallel
Strand 3	C	271	276	parallel
Strand 4	C	229	232	parallel
Strand 5	C	109	115	parallel
Strand 6	C	188	196	parallel
Strand 7	C	202	205	anti-parallel
Strand 8	C	239	240	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	161	163	first strand
Strand 2	C	176	177	anti-parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	84	89	first strand
Strand 2	D	92	98	anti-parallel
Strand 3	D	271	276	parallel
Strand 4	D	229	232	parallel
Strand 5	D	109	115	parallel
Strand 6	D	188	196	parallel
Strand 7	D	182	185	anti-parallel

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There are 8 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	84	89	first strand
Strand 2	D	92	98	anti-parallel
Strand 3	D	271	276	parallel
Strand 4	D	229	232	parallel
Strand 5	D	109	115	parallel
Strand 6	D	188	196	parallel
Strand 7	D	202	205	anti-parallel
Strand 8	D	239	240	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	161	163	first strand
Strand 2	D	176	177	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9UUZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
9UUZ