Analysis of interatomic Contacts of Structural Units in PDB entry:
9UV3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9UV3 entry

There are 4 chains in PDB entry 9UV3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 TYR 403ASN 510
C
 MET 1LEU 462
D
 TYR 403ASN 510
A
 MET 1LEU 462
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 59 helices in PDB entry 9UV3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
405 418Right-handed alpha
Helix 2
AA2
B
421 443Right-handed alpha
Helix 3
AA3
B
444 445Right-handed 310
Helix 4
AA4
B
446 448Right-handed 310
Helix 5
AA5
B
449 461Right-handed alpha
Helix 6
AA6
B
464 473Right-handed alpha
Helix 7
AA7
B
476 508Right-handed alpha
Helix 8
AA8
C
2 23Right-handed alpha
Helix 9
AA9
C
24 26Right-handed 310
Helix 10
AB1
C
29 50Right-handed alpha
Helix 11
AB2
C
56 78Right-handed alpha
Helix 12
AB3
C
79 81Right-handed 310
Helix 13
AB4
C
82 108Right-handed alpha
Helix 14
AB5
C
114 148Right-handed alpha
Helix 15
AB6
C
159 181Right-handed alpha
Helix 16
AB7
C
183 208Right-handed alpha
Helix 17
AB8
C
210 212Right-handed 310
Helix 18
AB9
C
213 236Right-handed alpha
Helix 19
AC1
C
238 264Right-handed alpha
Helix 20
AC2
C
266 272Right-handed alpha
Helix 21
AC3
C
273 278Right-handed alpha
Helix 22
AC4
C
295 306Right-handed alpha
Helix 23
AC5
C
314 320Right-handed alpha
Helix 24
AC6
C
322 336Right-handed alpha
Helix 25
AC7
C
353 362Right-handed alpha
Helix 26
AC8
C
372 377Right-handed alpha
Helix 27
AC9
C
378 381Right-handed 310
Helix 28
AD1
C
395 399Right-handed 310
Helix 29
AD2
C
413 417Right-handed 310
Helix 30
AD3
C
436 441Right-handed 310
Helix 31
AD4
C
450 462Right-handed alpha
Helix 32
AD5
D
407 418Right-handed alpha
Helix 33
AD6
D
421 443Right-handed alpha
Helix 34
AD7
D
444 445Right-handed 310
Helix 35
AD8
D
446 448Right-handed 310
Helix 36
AD9
D
449 462Right-handed alpha
Helix 37
AE1
D
464 472Right-handed alpha
Helix 38
AE2
D
476 508Right-handed alpha
Helix 39
AE3
A
2 24Right-handed alpha
Helix 40
AE4
A
26 50Right-handed alpha
Helix 41
AE5
A
56 78Right-handed alpha
Helix 42
AE6
A
79 81Right-handed 310
Helix 43
AE7
A
82 108Right-handed alpha
Helix 44
AE8
A
114 148Right-handed alpha
Helix 45
AE9
A
159 181Right-handed alpha
Helix 46
AF1
A
183 208Right-handed alpha
Helix 47
AF2
A
210 212Right-handed 310
Helix 48
AF3
A
213 237Right-handed alpha
Helix 49
AF4
A
238 264Right-handed alpha
Helix 50
AF5
A
266 272Right-handed alpha
Helix 51
AF6
A
295 306Right-handed alpha
Helix 52
AF7
A
322 337Right-handed alpha
Helix 53
AF8
A
353 362Right-handed alpha
Helix 54
AF9
A
372 377Right-handed alpha
Helix 55
AG1
A
378 380Right-handed 310
Helix 56
AG2
A
395 399Right-handed 310
Helix 57
AG3
A
413 417Right-handed 310
Helix 58
AG4
A
436 441Right-handed 310
Helix 59
AG5
A
450 462Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 9UV3. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
369 371first strand
Strand 2
C
339 344parallel
Strand 3
C
308 313parallel
Strand 4
C
384 388parallel
Strand 5
C
419 423parallel
Strand 6
C
444 446parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
369 371first strand
Strand 2
A
339 344parallel
Strand 3
A
308 313parallel
Strand 4
A
384 388parallel
Strand 5
A
419 424parallel
Strand 6
A
444 448parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il