Analysis of interatomic Contacts of Structural Units in PDB entry:
9UVO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9UVO entry

There are 3 chains in PDB entry 9UVO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 SER 5THR 239
A
 ALA 2LYS 240
C
 ILE 4LYS 240
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 9UVO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
16 20Right-handed 310
Helix 2
AA2
B
28 44Right-handed alpha
Helix 3
AA3
B
60 66Right-handed alpha
Helix 4
AA4
B
70 96Right-handed alpha
Helix 5
AA5
B
116 126Right-handed alpha
Helix 6
AA6
B
142 154Right-handed alpha
Helix 7
AA7
B
187 194Right-handed alpha
Helix 8
AA8
B
200 210Right-handed alpha
Helix 9
AA9
B
223 230Right-handed alpha
Helix 10
AB1
A
16 20Right-handed 310
Helix 11
AB2
A
28 43Right-handed alpha
Helix 12
AB3
A
60 66Right-handed alpha
Helix 13
AB4
A
70 96Right-handed alpha
Helix 14
AB5
A
116 126Right-handed alpha
Helix 15
AB6
A
142 154Right-handed alpha
Helix 16
AB7
A
188 194Right-handed alpha
Helix 17
AB8
A
200 210Right-handed alpha
Helix 18
AB9
A
223 230Right-handed alpha
Helix 19
AC1
C
15 20Right-handed alpha
Helix 20
AC2
C
28 44Right-handed alpha
Helix 21
AC3
C
60 68Right-handed alpha
Helix 22
AC4
C
70 96Right-handed alpha
Helix 23
AC5
C
116 126Right-handed alpha
Helix 24
AC6
C
142 154Right-handed alpha
Helix 25
AC7
C
188 194Right-handed alpha
Helix 26
AC8
C
200 210Right-handed alpha
Helix 27
AC9
C
223 230Right-handed alpha
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There are 3 sheets in PDB entry 9UVO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
113 114first strand
Strand 2
B
100 104parallel
Strand 3
B
129 133parallel
Strand 4
B
48 53parallel
Strand 5
B
9 14parallel
Strand 6
B
158 163parallel
Strand 7
B
214 218parallel
Strand 8
B
236 238anti-parallel
Strand 9
B
185 186parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
113 114first strand
Strand 2
A
100 104parallel
Strand 3
A
129 133parallel
Strand 4
A
46 53parallel
Strand 5
A
4 14parallel
Strand 6
A
158 163parallel
Strand 7
A
214 218parallel
Strand 8
A
236 239anti-parallel
Strand 9
A
185 187parallel
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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
113 114first strand
Strand 2
C
100 104parallel
Strand 3
C
129 132parallel
Strand 4
C
48 53parallel
Strand 5
C
9 14parallel
Strand 6
C
158 163parallel
Strand 7
C
214 218parallel
Strand 8
C
236 239anti-parallel
Strand 9
C
185 187parallel
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