Analysis of interatomic Contacts of Structural Units in PDB entry:
9UVR

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9UVR entry

There are 2 chains in PDB entry 9UVR (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 15	THR 435
B	ASP 15	THR 435

There are 12 helices in PDB entry 9UVR. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	57	65	Right-handed alpha
Helix 2	AA2	A	66	75	Right-handed alpha
Helix 3	AA3	A	81	92	Right-handed alpha
Helix 4	AA4	A	93	95	Right-handed 310
Helix 5	AA5	A	233	236	Right-handed 310
Helix 6	AA6	A	253	255	Right-handed 310
Helix 7	AA7	B	57	65	Right-handed alpha
Helix 8	AA8	B	66	75	Right-handed alpha
Helix 9	AA9	B	81	92	Right-handed alpha
Helix 10	AB1	B	93	95	Right-handed 310
Helix 11	AB2	B	233	236	Right-handed 310
Helix 12	AB3	B	253	255	Right-handed 310

There are 20 sheets in PDB entry 9UVR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	108	115	first strand
Strand 2	A	18	25	anti-parallel
Strand 3	A	148	151	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	51	52	first strand
Strand 2	A	30	38	anti-parallel
Strand 3	A	101	104	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	51	52	first strand
Strand 2	A	30	38	anti-parallel
Strand 3	A	119	124	anti-parallel
Strand 4	A	141	144	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	41	42	first strand
Strand 2	A	46	47	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	171	172	first strand
Strand 2	A	158	164	anti-parallel
Strand 3	A	182	190	anti-parallel
Strand 4	A	263	272	anti-parallel
Strand 5	A	213	215	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	171	172	first strand
Strand 2	A	158	164	anti-parallel
Strand 3	A	182	190	anti-parallel
Strand 4	A	263	272	anti-parallel
Strand 5	A	220	224	anti-parallel
Strand 6	A	230	231	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	174	176	first strand
Strand 2	A	308	313	parallel
Strand 3	A	283	292	anti-parallel
Strand 4	A	202	208	anti-parallel
Strand 5	A	244	251	anti-parallel
Strand 6	A	238	240	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	174	176	first strand
Strand 2	A	308	313	parallel
Strand 3	A	283	292	anti-parallel
Strand 4	A	302	304	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	357	363	first strand
Strand 2	A	315	321	anti-parallel
Strand 3	A	419	424	parallel
Strand 4	A	412	414	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	343	348	first strand
Strand 2	A	335	340	anti-parallel
Strand 3	A	366	371	anti-parallel
Strand 4	A	385	393	anti-parallel
Strand 5	A	399	406	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	108	115	first strand
Strand 2	B	18	25	anti-parallel
Strand 3	B	148	151	parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	51	52	first strand
Strand 2	B	30	38	anti-parallel
Strand 3	B	101	104	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	51	52	first strand
Strand 2	B	30	38	anti-parallel
Strand 3	B	119	124	anti-parallel
Strand 4	B	141	144	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	41	42	first strand
Strand 2	B	46	47	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	171	172	first strand
Strand 2	B	159	164	anti-parallel
Strand 3	B	182	190	anti-parallel
Strand 4	B	263	272	anti-parallel
Strand 5	B	213	215	anti-parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	171	172	first strand
Strand 2	B	159	164	anti-parallel
Strand 3	B	182	190	anti-parallel
Strand 4	B	263	272	anti-parallel
Strand 5	B	220	224	anti-parallel
Strand 6	B	230	231	anti-parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	174	176	first strand
Strand 2	B	308	313	parallel
Strand 3	B	283	292	anti-parallel
Strand 4	B	202	208	anti-parallel
Strand 5	B	244	251	anti-parallel
Strand 6	B	238	240	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	174	176	first strand
Strand 2	B	308	313	parallel
Strand 3	B	283	292	anti-parallel
Strand 4	B	302	304	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	357	363	first strand
Strand 2	B	315	321	anti-parallel
Strand 3	B	419	424	parallel
Strand 4	B	412	414	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	343	348	first strand
Strand 2	B	335	340	anti-parallel
Strand 3	B	366	371	anti-parallel
Strand 4	B	385	393	anti-parallel
Strand 5	B	399	406	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9UVR

Analysis of interatomic Contacts of Structural Units in PDB entry:
9UVR