Analysis of interatomic Contacts of Structural Units in PDB entry:
9UWB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9UWB entry

There are 2 chains in PDB entry 9UWB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 11TRP 401
B
 ALA 12TRP 401
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 9UWB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 23Right-handed alpha
Helix 2
AA2
A
28 37Right-handed alpha
Helix 3
AA3
A
44 48Right-handed 310
Helix 4
AA4
A
49 76Right-handed alpha
Helix 5
AA5
A
80 102Right-handed alpha
Helix 6
AA6
A
104 114Right-handed alpha
Helix 7
AA7
A
120 146Right-handed alpha
Helix 8
AA8
A
147 152Right-handed 310
Helix 9
AA9
A
157 162Right-handed alpha
Helix 10
AB1
A
204 214Right-handed alpha
Helix 11
AB2
A
250 252Right-handed 310
Helix 12
AB3
A
290 292Right-handed 310
Helix 13
AB4
A
293 307Right-handed alpha
Helix 14
AB5
B
13 23Right-handed alpha
Helix 15
AB6
B
28 36Right-handed alpha
Helix 16
AB7
B
44 48Right-handed 310
Helix 17
AB8
B
49 76Right-handed alpha
Helix 18
AB9
B
80 102Right-handed alpha
Helix 19
AC1
B
104 114Right-handed alpha
Helix 20
AC2
B
120 146Right-handed alpha
Helix 21
AC3
B
147 152Right-handed 310
Helix 22
AC4
B
204 214Right-handed alpha
Helix 23
AC5
B
250 252Right-handed 310
Helix 24
AC6
B
288 292Right-handed 310
Helix 25
AC7
B
293 307Right-handed alpha
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There are 4 sheets in PDB entry 9UWB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
217 220first strand
Strand 2
A
313 318anti-parallel
Strand 3
A
182 189anti-parallel
Strand 4
A
193 199anti-parallel
Strand 5
A
279 286anti-parallel
Strand 6
A
256 260anti-parallel
Strand 7
A
266 274anti-parallel
Strand 8
A
228 234anti-parallel
Strand 9
A
222 223anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
217 220first strand
Strand 2
A
313 318anti-parallel
Strand 3
A
182 189anti-parallel
Strand 4
A
193 199anti-parallel
Strand 5
A
279 286anti-parallel
Strand 6
A
246 248anti-parallel
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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
217 220first strand
Strand 2
B
313 318anti-parallel
Strand 3
B
181 189anti-parallel
Strand 4
B
193 200anti-parallel
Strand 5
B
279 286anti-parallel
Strand 6
B
256 260anti-parallel
Strand 7
B
266 274anti-parallel
Strand 8
B
228 234anti-parallel
Strand 9
B
222 223anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
217 220first strand
Strand 2
B
313 318anti-parallel
Strand 3
B
181 189anti-parallel
Strand 4
B
193 200anti-parallel
Strand 5
B
279 286anti-parallel
Strand 6
B
246 248anti-parallel
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