Analysis of interatomic Contacts of Structural Units in PDB entry:
9UWG

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9UWG entry

There are 2 chains in PDB entry 9UWG (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 2	HIS 1140
B	MET 1	GLY 393

There are 12 helices in PDB entry 9UWG. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	250	255	Right-handed 310
Helix 2	AA2	A	381	384	Right-handed 310
Helix 3	AA3	A	986	990	Right-handed alpha
Helix 4	AA4	A	1044	1062	Right-handed alpha
Helix 5	AA5	A	1069	1075	Right-handed alpha
Helix 6	AA6	A	1091	1096	Right-handed alpha
Helix 7	AA7	A	1097	1099	Right-handed 310
Helix 8	AA8	A	1101	1109	Right-handed alpha
Helix 9	AA9	A	1126	1138	Right-handed alpha
Helix 10	AB1	B	4	9	Right-handed alpha
Helix 11	AB2	B	9	14	Right-handed alpha
Helix 12	AB3	B	28	30	Right-handed 310

There are 24 sheets in PDB entry 9UWG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1004	1009	first strand
Strand 2	A	1028	1032	anti-parallel
Strand 3	A	1037	1042	anti-parallel
Strand 4	A	4	10	anti-parallel
Strand 5	A	1088	1090	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	19	21	first strand
Strand 2	A	30	35	anti-parallel
Strand 3	A	38	45	anti-parallel
Strand 4	A	48	56	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	61	67	first strand
Strand 2	A	76	81	anti-parallel
Strand 3	A	85	91	anti-parallel
Strand 4	A	100	107	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	121	124	first strand
Strand 2	A	130	134	anti-parallel
Strand 3	A	139	144	anti-parallel
Strand 4	A	156	158	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	164	169	first strand
Strand 2	A	177	184	anti-parallel
Strand 3	A	187	196	anti-parallel
Strand 4	A	201	204	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	164	169	first strand
Strand 2	A	177	184	anti-parallel
Strand 3	A	187	196	anti-parallel
Strand 4	A	210	212	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	218	221	first strand
Strand 2	A	229	232	anti-parallel
Strand 3	A	237	240	anti-parallel
Strand 4	A	245	248	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	258	263	first strand
Strand 2	A	270	275	anti-parallel
Strand 3	A	279	287	anti-parallel
Strand 4	A	297	307	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	311	318	first strand
Strand 2	A	321	326	anti-parallel
Strand 3	A	331	336	anti-parallel
Strand 4	A	347	353	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	361	365	first strand
Strand 2	A	374	379	anti-parallel
Strand 3	A	386	391	anti-parallel
Strand 4	A	711	716	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	720	727	first strand
Strand 2	A	732	742	anti-parallel
Strand 3	A	750	751	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	720	727	first strand
Strand 2	A	732	742	anti-parallel
Strand 3	A	786	795	anti-parallel
Strand 4	A	801	806	anti-parallel
Strand 5	A	762	764	parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	813	820	first strand
Strand 2	A	827	833	anti-parallel
Strand 3	A	846	854	anti-parallel
Strand 4	A	857	866	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	870	876	first strand
Strand 2	A	879	884	anti-parallel
Strand 3	A	887	893	anti-parallel
Strand 4	A	899	905	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	913	917	first strand
Strand 2	A	920	924	anti-parallel
Strand 3	A	931	936	anti-parallel
Strand 4	A	941	947	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	954	959	first strand
Strand 2	A	964	969	anti-parallel
Strand 3	A	973	978	anti-parallel
Strand 4	A	993	999	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1076	1077	first strand
Strand 2	A	1082	1083	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	32	40	first strand
Strand 2	B	385	390	anti-parallel
Strand 3	B	375	380	anti-parallel
Strand 4	B	363	368	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	56	57	first strand
Strand 2	B	66	69	anti-parallel
Strand 3	B	75	80	anti-parallel
Strand 4	B	94	95	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	101	106	first strand
Strand 2	B	113	117	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	143	147	first strand
Strand 2	B	156	160	anti-parallel
Strand 3	B	165	168	anti-parallel
Strand 4	B	183	185	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	219	224	first strand
Strand 2	B	229	234	anti-parallel
Strand 3	B	240	244	anti-parallel
Strand 4	B	260	262	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	274	279	first strand
Strand 2	B	285	290	anti-parallel
Strand 3	B	294	299	anti-parallel
Strand 4	B	309	312	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	323	325	first strand
Strand 2	B	331	334	anti-parallel
Strand 3	B	341	345	anti-parallel
Strand 4	B	354	356	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9UWG

Analysis of interatomic Contacts of Structural Units in PDB entry:
9UWG