Analysis of interatomic Contacts of Structural Units in PDB entry:
9UX0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9UX0 entry

There are 3 chains in PDB entry 9UX0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 11ILE 492
B
 GLN 5GLN 134
C
 ASN 2GLN 134
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 9UX0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 23Right-handed alpha
Helix 2
AA2
A
39 44Right-handed 310
Helix 3
AA3
A
53 83Right-handed alpha
Helix 4
AA4
A
84 93Right-handed alpha
Helix 5
AA5
A
95 101Right-handed alpha
Helix 6
AA6
A
106 123Right-handed alpha
Helix 7
AA7
A
124 139Right-handed alpha
Helix 8
AA8
A
140 151Right-handed alpha
Helix 9
AA9
A
157 164Right-handed alpha
Helix 10
AB1
A
175 192Right-handed alpha
Helix 11
AB2
A
203 217Right-handed alpha
Helix 12
AB3
A
225 236Right-handed alpha
Helix 13
AB4
A
337 349Right-handed alpha
Helix 14
AB5
A
353 358Right-handed alpha
Helix 15
AB6
A
362 379Right-handed alpha
Helix 16
AB7
A
404 421Right-handed alpha
Helix 17
AB8
A
424 434Right-handed alpha
Helix 18
AB9
A
436 438Right-handed 310
Helix 19
AC1
A
439 444Right-handed alpha
Helix 20
AC2
A
466 476Right-handed alpha
Helix 21
AC3
A
480 489Right-handed alpha
Helix 22
AC4
B
7 16Right-handed alpha
Helix 23
AC5
B
60 75Right-handed alpha
Helix 24
AC6
B
80 84Right-handed 310
Helix 25
AC7
B
104 106Right-handed 310
Helix 26
AC8
B
108 131Right-handed alpha
Helix 27
AC9
C
4 15Right-handed alpha
Helix 28
AD1
C
61 75Right-handed alpha
Helix 29
AD2
C
104 106Right-handed 310
Helix 30
AD3
C
107 131Right-handed alpha
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There are 5 sheets in PDB entry 9UX0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 33first strand
Strand 2
A
36 38anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 51first strand
Strand 2
B
27 32anti-parallel
Strand 3
B
36 42anti-parallel
Strand 4
B
47 56anti-parallel
Strand 5
B
94 102anti-parallel
Strand 6
B
85 88anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
322 326first strand
Strand 2
A
329 333anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
446 449first strand
Strand 2
A
458 461anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
27 32first strand
Strand 2
C
36 42anti-parallel
Strand 3
C
47 54anti-parallel
Strand 4
C
95 102anti-parallel
Strand 5
C
85 88anti-parallel
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