Analysis of interatomic Contacts of Structural Units in PDB entry:
9UX8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9UX8 entry

There are 3 chains in PDB entry 9UX8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1SER 562
B
 MET 1SER 562
C
 LEU 12GLU 315
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 47 helices in PDB entry 9UX8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
36 48Right-handed alpha
Helix 2
AA2
A
96 108Right-handed alpha
Helix 3
AA3
A
126 132Right-handed alpha
Helix 4
AA4
A
133 135Right-handed 310
Helix 5
AA5
A
161 169Right-handed alpha
Helix 6
AA6
A
173 211Right-handed alpha
Helix 7
AA7
A
223 276Right-handed alpha
Helix 8
AA8
A
294 303Right-handed alpha
Helix 9
AA9
A
306 351Right-handed alpha
Helix 10
AB1
A
357 429Right-handed alpha
Helix 11
AB2
A
458 480Right-handed alpha
Helix 12
AB3
A
498 512Right-handed alpha
Helix 13
AB4
A
525 530Right-handed 310
Helix 14
AB5
A
550 556Right-handed alpha
Helix 15
AB6
B
36 47Right-handed alpha
Helix 16
AB7
B
96 108Right-handed alpha
Helix 17
AB8
B
126 132Right-handed alpha
Helix 18
AB9
B
161 169Right-handed alpha
Helix 19
AC1
B
176 211Right-handed alpha
Helix 20
AC2
B
225 281Right-handed alpha
Helix 21
AC3
B
294 299Right-handed alpha
Helix 22
AC4
B
299 351Right-handed alpha
Helix 23
AC5
B
353 428Right-handed alpha
Helix 24
AC6
B
429 434Right-handed alpha
Helix 25
AC7
B
442 446Right-handed 310
Helix 26
AC8
B
457 480Right-handed alpha
Helix 27
AC9
B
498 512Right-handed alpha
Helix 28
AD1
B
525 530Right-handed 310
Helix 29
AD2
B
532 536Right-handed 310
Helix 30
AD3
B
550 558Right-handed alpha
Helix 31
AD4
C
16 29Right-handed alpha
Helix 32
AD5
C
65 70Right-handed alpha
Helix 33
AD6
C
71 76Right-handed 310
Helix 34
AD7
C
78 85Right-handed alpha
Helix 35
AD8
C
101 106Right-handed alpha
Helix 36
AD9
C
123 135Right-handed alpha
Helix 37
AE1
C
137 146Right-handed alpha
Helix 38
AE2
C
157 172Right-handed alpha
Helix 39
AE3
C
177 198Right-handed alpha
Helix 40
AE4
C
202 210Right-handed alpha
Helix 41
AE5
C
213 236Right-handed alpha
Helix 42
AE6
C
239 251Right-handed alpha
Helix 43
AE7
C
252 257Right-handed alpha
Helix 44
AE8
C
258 268Right-handed alpha
Helix 45
AE9
C
269 276Right-handed alpha
Helix 46
AF1
C
277 293Right-handed alpha
Helix 47
AF2
C
300 315Right-handed alpha
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There are 8 sheets in PDB entry 9UX8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 20first strand
Strand 2
A
2 10anti-parallel
Strand 3
A
64 72anti-parallel
Strand 4
A
75 82anti-parallel
Strand 5
A
85 88anti-parallel
Strand 6
A
91 95anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
486 488first strand
Strand 2
A
517 523parallel
Strand 3
A
24 30parallel
Strand 4
A
537 541parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
113 115first strand
Strand 2
A
122 124anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
15 20first strand
Strand 2
B
2 10anti-parallel
Strand 3
B
66 72anti-parallel
Strand 4
B
75 82anti-parallel
Strand 5
B
85 88anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
135 136first strand
Strand 2
B
486 488parallel
Strand 3
B
518 523parallel
Strand 4
B
25 30parallel
Strand 5
B
537 540parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
122 124first strand
Strand 2
B
113 116anti-parallel
Strand 3
B
157 158anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
147 151first strand
Strand 2
C
92 97parallel
Strand 3
C
52 58parallel
Strand 4
C
44 49anti-parallel
Strand 5
C
36 38anti-parallel
Strand 6
C
211 212anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
109 112first strand
Strand 2
C
118 121anti-parallel
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