Analysis of interatomic Contacts of Structural Units in PDB entry:
9UZ6

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9UZ6 entry

There are 2 chains in PDB entry 9UZ6 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 3	VAL 952
B	THR 3	VAL 952

There are 86 helices in PDB entry 9UZ6. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	5	11	Right-handed alpha
Helix 2	AA2	A	13	20	Right-handed alpha
Helix 3	AA3	A	23	34	Right-handed alpha
Helix 4	AA4	A	38	47	Right-handed alpha
Helix 5	AA5	A	48	52	Right-handed 310
Helix 6	AA6	A	64	77	Right-handed alpha
Helix 7	AA7	A	96	103	Right-handed alpha
Helix 8	AA8	A	106	111	Right-handed alpha
Helix 9	AA9	A	117	120	Right-handed 310
Helix 10	AB1	A	121	140	Right-handed alpha
Helix 11	AB2	A	150	166	Right-handed alpha
Helix 12	AB3	A	181	196	Right-handed alpha
Helix 13	AB4	A	203	209	Right-handed 310
Helix 14	AB5	A	230	240	Right-handed alpha
Helix 15	AB6	A	251	256	Right-handed alpha
Helix 16	AB7	A	258	263	Right-handed 310
Helix 17	AB8	A	292	298	Right-handed 310
Helix 18	AB9	A	339	379	Right-handed alpha
Helix 19	AC1	A	398	409	Right-handed alpha
Helix 20	AC2	A	430	443	Right-handed alpha
Helix 21	AC3	A	449	460	Right-handed alpha
Helix 22	AC4	A	465	469	Right-handed 310
Helix 23	AC5	A	477	481	Right-handed 310
Helix 24	AC6	A	485	499	Right-handed alpha
Helix 25	AC7	A	519	524	Right-handed alpha
Helix 26	AC8	A	525	528	Right-handed 310
Helix 27	AC9	A	539	542	Right-handed 310
Helix 28	AD1	A	543	562	Right-handed alpha
Helix 29	AD2	A	572	591	Right-handed alpha
Helix 30	AD3	A	607	616	Right-handed alpha
Helix 31	AD4	A	632	644	Right-handed alpha
Helix 32	AD5	A	664	675	Right-handed alpha
Helix 33	AD6	A	683	689	Right-handed 310
Helix 34	AD7	A	694	699	Right-handed alpha
Helix 35	AD8	A	706	711	Right-handed alpha
Helix 36	AD9	A	731	735	Right-handed 310
Helix 37	AE1	A	760	762	Right-handed 310
Helix 38	AE2	A	763	798	Right-handed alpha
Helix 39	AE3	A	820	828	Right-handed alpha
Helix 40	AE4	A	830	841	Right-handed alpha
Helix 41	AE5	A	865	888	Right-handed alpha
Helix 42	AE6	A	904	909	Right-handed alpha
Helix 43	AE7	A	917	923	Right-handed alpha
Helix 44	AE8	B	5	11	Right-handed alpha
Helix 45	AE9	B	13	20	Right-handed alpha
Helix 46	AF1	B	23	34	Right-handed alpha
Helix 47	AF2	B	38	47	Right-handed alpha
Helix 48	AF3	B	48	52	Right-handed 310
Helix 49	AF4	B	64	77	Right-handed alpha
Helix 50	AF5	B	96	103	Right-handed alpha
Helix 51	AF6	B	106	111	Right-handed alpha
Helix 52	AF7	B	117	120	Right-handed 310
Helix 53	AF8	B	121	140	Right-handed alpha
Helix 54	AF9	B	150	166	Right-handed alpha
Helix 55	AG1	B	181	196	Right-handed alpha
Helix 56	AG2	B	203	209	Right-handed 310
Helix 57	AG3	B	230	240	Right-handed alpha
Helix 58	AG4	B	251	256	Right-handed alpha
Helix 59	AG5	B	258	263	Right-handed 310
Helix 60	AG6	B	292	298	Right-handed 310
Helix 61	AG7	B	339	379	Right-handed alpha
Helix 62	AG8	B	398	409	Right-handed alpha
Helix 63	AG9	B	430	443	Right-handed alpha
Helix 64	AH1	B	449	460	Right-handed alpha
Helix 65	AH2	B	465	469	Right-handed 310
Helix 66	AH3	B	477	481	Right-handed 310
Helix 67	AH4	B	485	499	Right-handed alpha
Helix 68	AH5	B	519	524	Right-handed alpha
Helix 69	AH6	B	525	528	Right-handed 310
Helix 70	AH7	B	539	542	Right-handed 310
Helix 71	AH8	B	543	562	Right-handed alpha
Helix 72	AH9	B	572	591	Right-handed alpha
Helix 73	AI1	B	607	616	Right-handed alpha
Helix 74	AI2	B	632	644	Right-handed alpha
Helix 75	AI3	B	664	675	Right-handed alpha
Helix 76	AI4	B	683	689	Right-handed 310
Helix 77	AI5	B	694	699	Right-handed alpha
Helix 78	AI6	B	706	711	Right-handed alpha
Helix 79	AI7	B	731	735	Right-handed 310
Helix 80	AI8	B	760	762	Right-handed 310
Helix 81	AI9	B	763	798	Right-handed alpha
Helix 82	AJ1	B	820	828	Right-handed alpha
Helix 83	AJ2	B	830	841	Right-handed alpha
Helix 84	AJ3	B	865	888	Right-handed alpha
Helix 85	AJ4	B	904	909	Right-handed alpha
Helix 86	AJ5	B	917	923	Right-handed alpha

There are 14 sheets in PDB entry 9UZ6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	83	85	first strand
Strand 2	A	411	413	parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	143	144	first strand
Strand 2	A	286	290	anti-parallel
Strand 3	A	266	270	anti-parallel
Strand 4	A	243	247	parallel
Strand 5	A	213	219	parallel
Strand 6	A	173	177	parallel
Strand 7	A	198	202	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	303	307	first strand
Strand 2	A	313	317	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	382	383	first strand
Strand 2	A	391	395	anti-parallel
Strand 3	A	421	424	anti-parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	565	567	first strand
Strand 2	A	725	727	anti-parallel
Strand 3	A	702	704	anti-parallel
Strand 4	A	678	682	parallel
Strand 5	A	647	653	parallel
Strand 6	A	598	602	parallel
Strand 7	A	619	623	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	625	627	first strand
Strand 2	A	630	631	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	803	804	first strand
Strand 2	A	816	819	anti-parallel
Strand 3	A	855	858	anti-parallel
Strand 4	A	847	848	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	83	85	first strand
Strand 2	B	411	413	parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	143	144	first strand
Strand 2	B	286	290	anti-parallel
Strand 3	B	266	270	anti-parallel
Strand 4	B	243	247	parallel
Strand 5	B	213	219	parallel
Strand 6	B	173	177	parallel
Strand 7	B	198	202	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	303	307	first strand
Strand 2	B	313	317	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	382	383	first strand
Strand 2	B	391	395	anti-parallel
Strand 3	B	421	424	anti-parallel

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There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	565	567	first strand
Strand 2	B	725	727	anti-parallel
Strand 3	B	702	704	anti-parallel
Strand 4	B	678	682	parallel
Strand 5	B	647	653	parallel
Strand 6	B	598	602	parallel
Strand 7	B	619	623	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	625	627	first strand
Strand 2	B	630	631	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	803	804	first strand
Strand 2	B	816	819	anti-parallel
Strand 3	B	855	858	anti-parallel
Strand 4	B	847	848	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9UZ6

Analysis of interatomic Contacts of Structural Units in PDB entry:
9UZ6