Analysis of interatomic Contacts of Structural Units in PDB entry:
9V0S

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9V0S entry

There are 9 chains in PDB entry 9V0S (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	GLN 26	LEU 513
D	VAL 2	SER 122
E	GLN 1	LEU 110
A	GLN 26	LEU 513
F	VAL 2	SER 122
H	GLN 1	LEU 110
C	GLN 26	LEU 513
G	VAL 2	SER 122
I	GLN 1	LEU 110

There are 46 helices in PDB entry 9V0S. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	73	95	Right-handed alpha
Helix 2	AA2	B	148	160	Right-handed alpha
Helix 3	AA3	B	162	171	Right-handed alpha
Helix 4	AA4	B	194	200	Right-handed alpha
Helix 5	AA5	B	203	208	Right-handed alpha
Helix 6	AA6	B	217	240	Right-handed alpha
Helix 7	AA7	B	253	263	Right-handed alpha
Helix 8	AA8	B	267	277	Right-handed alpha
Helix 9	AA9	B	277	285	Right-handed alpha
Helix 10	AB1	B	368	372	Right-handed 310
Helix 11	AB2	B	376	381	Right-handed 310
Helix 12	AB3	B	473	478	Right-handed 310
Helix 13	AB4	B	491	512	Right-handed alpha
Helix 14	AB5	D	87	91	Right-handed 310
Helix 15	AB6	E	81	85	Right-handed 310
Helix 16	AB7	A	73	95	Right-handed alpha
Helix 17	AB8	A	148	159	Right-handed alpha
Helix 18	AB9	A	162	171	Right-handed alpha
Helix 19	AC1	A	194	200	Right-handed alpha
Helix 20	AC2	A	203	208	Right-handed alpha
Helix 21	AC3	A	217	240	Right-handed alpha
Helix 22	AC4	A	253	263	Right-handed alpha
Helix 23	AC5	A	267	277	Right-handed alpha
Helix 24	AC6	A	277	283	Right-handed alpha
Helix 25	AC7	A	368	372	Right-handed 310
Helix 26	AC8	A	376	383	Right-handed 310
Helix 27	AC9	A	473	478	Right-handed 310
Helix 28	AD1	A	491	512	Right-handed alpha
Helix 29	AD2	F	87	91	Right-handed 310
Helix 30	AD3	H	81	85	Right-handed 310
Helix 31	AD4	C	73	96	Right-handed alpha
Helix 32	AD5	C	148	160	Right-handed alpha
Helix 33	AD6	C	162	171	Right-handed alpha
Helix 34	AD7	C	194	200	Right-handed alpha
Helix 35	AD8	C	203	208	Right-handed alpha
Helix 36	AD9	C	217	240	Right-handed alpha
Helix 37	AE1	C	253	263	Right-handed alpha
Helix 38	AE2	C	267	277	Right-handed alpha
Helix 39	AE3	C	277	283	Right-handed alpha
Helix 40	AE4	C	368	372	Right-handed 310
Helix 41	AE5	C	376	379	Right-handed 310
Helix 42	AE6	C	380	385	Right-handed alpha
Helix 43	AE7	C	473	478	Right-handed 310
Helix 44	AE8	C	492	512	Right-handed alpha
Helix 45	AE9	G	87	91	Right-handed 310
Helix 46	AF1	I	81	85	Right-handed 310

There are 33 sheets in PDB entry 9V0S. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	373	375	first strand
Strand 2	B	348	352	anti-parallel
Strand 3	B	340	345	anti-parallel
Strand 4	B	313	318	anti-parallel
Strand 5	B	38	42	anti-parallel
Strand 6	B	29	33	anti-parallel
Strand 7	B	466	469	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	46	47	first strand
Strand 2	B	309	311	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	51	53	first strand
Strand 2	B	298	305	anti-parallel
Strand 3	B	55	58	anti-parallel
Strand 4	B	187	191	parallel
Strand 5	B	178	179	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	51	53	first strand
Strand 2	B	298	305	anti-parallel
Strand 3	B	286	289	anti-parallel
Strand 4	B	243	244	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	321	322	first strand
Strand 2	B	333	335	anti-parallel
Strand 3	B	396	398	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	404	407	first strand
Strand 2	B	412	416	anti-parallel
Strand 3	B	438	442	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	430	431	first strand
Strand 2	B	422	426	anti-parallel
Strand 3	B	449	452	anti-parallel
Strand 4	B	455	457	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	6	7	first strand
Strand 2	D	19	22	anti-parallel
Strand 3	D	78	83	anti-parallel
Strand 4	D	68	73	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	10	11	first strand
Strand 2	D	116	119	parallel
Strand 3	D	92	99	anti-parallel
Strand 4	D	33	39	anti-parallel
Strand 5	D	46	52	anti-parallel
Strand 6	D	59	60	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	18	23	first strand
Strand 2	E	72	77	anti-parallel
Strand 3	E	64	69	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	37	39	first strand
Strand 2	E	47	50	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	86	88	first strand
Strand 2	E	105	107	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	373	375	first strand
Strand 2	A	348	352	anti-parallel
Strand 3	A	340	345	anti-parallel
Strand 4	A	314	317	anti-parallel
Strand 5	A	38	42	anti-parallel
Strand 6	A	29	33	anti-parallel
Strand 7	A	466	469	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	51	53	first strand
Strand 2	A	298	305	anti-parallel
Strand 3	A	55	58	anti-parallel
Strand 4	A	187	191	parallel
Strand 5	A	178	179	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	51	53	first strand
Strand 2	A	298	305	anti-parallel
Strand 3	A	286	289	anti-parallel
Strand 4	A	243	244	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	333	335	first strand
Strand 2	A	396	398	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	404	406	first strand
Strand 2	A	412	416	anti-parallel
Strand 3	A	438	442	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	430	431	first strand
Strand 2	A	422	426	anti-parallel
Strand 3	A	449	452	anti-parallel
Strand 4	A	455	457	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	6	7	first strand
Strand 2	F	19	22	anti-parallel
Strand 3	F	78	83	anti-parallel
Strand 4	F	68	73	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	10	11	first strand
Strand 2	F	116	119	parallel
Strand 3	F	92	99	anti-parallel
Strand 4	F	33	39	anti-parallel
Strand 5	F	46	51	anti-parallel
Strand 6	F	59	60	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	18	23	first strand
Strand 2	H	72	77	anti-parallel
Strand 3	H	64	69	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	37	39	first strand
Strand 2	H	47	50	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	86	88	first strand
Strand 2	H	105	107	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	373	375	first strand
Strand 2	C	348	352	anti-parallel
Strand 3	C	340	345	anti-parallel
Strand 4	C	313	318	anti-parallel
Strand 5	C	38	42	anti-parallel
Strand 6	C	29	33	anti-parallel
Strand 7	C	466	468	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	178	179	first strand
Strand 2	C	187	191	anti-parallel
Strand 3	C	51	58	parallel
Strand 4	C	298	305	anti-parallel
Strand 5	C	286	289	anti-parallel
Strand 6	C	243	244	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	333	335	first strand
Strand 2	C	394	398	anti-parallel
Strand 3	C	490	491	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	404	407	first strand
Strand 2	C	412	416	anti-parallel
Strand 3	C	438	442	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	430	431	first strand
Strand 2	C	422	426	anti-parallel
Strand 3	C	449	452	anti-parallel
Strand 4	C	455	457	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	6	7	first strand
Strand 2	G	19	22	anti-parallel
Strand 3	G	78	83	anti-parallel
Strand 4	G	68	73	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	10	11	first strand
Strand 2	G	116	119	parallel
Strand 3	G	92	99	anti-parallel
Strand 4	G	33	39	anti-parallel
Strand 5	G	45	51	anti-parallel
Strand 6	G	59	60	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	18	23	first strand
Strand 2	I	72	77	anti-parallel
Strand 3	I	64	69	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	37	39	first strand
Strand 2	I	47	50	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	86	88	first strand
Strand 2	I	105	107	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9V0S

Analysis of interatomic Contacts of Structural Units in PDB entry:
9V0S