Analysis of interatomic Contacts of Structural Units in PDB entry:
9V3C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9V3C entry

There are 2 chains in PDB entry 9V3C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 21ALA 306
D
 THR 1ARG 74
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 9V3C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
31 36Right-handed alpha
Helix 2
AA2
A
37 64Right-handed alpha
Helix 3
AA3
A
69 96Right-handed alpha
Helix 4
AA4
A
102 137Right-handed alpha
Helix 5
AA5
A
139 143Right-handed 310
Helix 6
AA6
A
146 167Right-handed alpha
Helix 7
AA7
A
167 172Right-handed alpha
Helix 8
AA8
A
193 209Right-handed alpha
Helix 9
AA9
A
209 226Right-handed alpha
Helix 10
AB1
A
232 259Right-handed alpha
Helix 11
AB2
A
263 300Right-handed alpha
Helix 12
AB3
A
301 306Right-handed alpha
Helix 13
AB4
D
2 11Right-handed alpha
Helix 14
AB5
D
15 26Right-handed alpha
Helix 15
AB6
D
33 38Right-handed alpha
Helix 16
AB7
D
39 41Right-handed 310
Helix 17
AB8
D
44 62Right-handed alpha
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There are 2 sheets in PDB entry 9V3C. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
176 178first strand
Strand 2
A
183 185anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
188 189first strand
Strand 2
D
67 68anti-parallel
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