Analysis of interatomic Contacts of Structural Units in PDB entry:
9V41


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9V41 entry

There are 2 chains in PDB entry 9V41 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 5ILE 537
B
 THR 5ILE 537
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 9V41. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 13Right-handed alpha
Helix 2
AA2
A
20 45Right-handed alpha
Helix 3
AA3
A
47 61Right-handed alpha
Helix 4
AA4
A
67 81Right-handed alpha
Helix 5
AA5
A
87 101Right-handed alpha
Helix 6
AA6
A
106 114Right-handed 310
Helix 7
AA7
A
121 126Right-handed 310
Helix 8
AA8
A
127 138Right-handed alpha
Helix 9
AA9
A
139 141Right-handed 310
Helix 10
AB1
A
145 165Right-handed alpha
Helix 11
AB2
A
173 185Right-handed alpha
Helix 12
AB3
A
186 190Right-handed 310
Helix 13
AB4
A
191 205Right-handed alpha
Helix 14
AB5
A
210 243Right-handed alpha
Helix 15
AB6
A
243 248Right-handed alpha
Helix 16
AB7
A
255 266Right-handed alpha
Helix 17
AB8
A
274 296Right-handed alpha
Helix 18
AB9
A
298 312Right-handed alpha
Helix 19
AC1
A
313 319Right-handed 310
Helix 20
AC2
A
324 347Right-handed alpha
Helix 21
AC3
A
350 375Right-handed alpha
Helix 22
AC4
A
379 388Right-handed alpha
Helix 23
AC5
A
392 405Right-handed alpha
Helix 24
AC6
A
409 417Right-handed alpha
Helix 25
AC7
A
420 437Right-handed alpha
Helix 26
AC8
A
450 459Right-handed alpha
Helix 27
AC9
A
462 487Right-handed alpha
Helix 28
AD1
A
492 510Right-handed alpha
Helix 29
AD2
A
522 532Right-handed alpha
Helix 30
AD3
B
7 13Right-handed alpha
Helix 31
AD4
B
20 45Right-handed alpha
Helix 32
AD5
B
47 61Right-handed alpha
Helix 33
AD6
B
67 82Right-handed alpha
Helix 34
AD7
B
87 101Right-handed alpha
Helix 35
AD8
B
106 114Right-handed 310
Helix 36
AD9
B
127 138Right-handed alpha
Helix 37
AE1
B
139 141Right-handed 310
Helix 38
AE2
B
148 165Right-handed alpha
Helix 39
AE3
B
174 185Right-handed alpha
Helix 40
AE4
B
186 190Right-handed 310
Helix 41
AE5
B
191 206Right-handed alpha
Helix 42
AE6
B
210 243Right-handed alpha
Helix 43
AE7
B
254 266Right-handed alpha
Helix 44
AE8
B
274 296Right-handed alpha
Helix 45
AE9
B
298 312Right-handed alpha
Helix 46
AF1
B
313 319Right-handed 310
Helix 47
AF2
B
321 346Right-handed alpha
Helix 48
AF3
B
350 374Right-handed alpha
Helix 49
AF4
B
379 388Right-handed alpha
Helix 50
AF5
B
392 405Right-handed alpha
Helix 51
AF6
B
409 417Right-handed alpha
Helix 52
AF7
B
420 437Right-handed alpha
Helix 53
AF8
B
450 460Right-handed alpha
Helix 54
AF9
B
462 488Right-handed alpha
Helix 55
AG1
B
492 510Right-handed alpha
Helix 56
AG2
B
523 532Right-handed alpha
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There are no sheets in PDB entry 9V41
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il