Analysis of interatomic Contacts of Structural Units in PDB entry:
9V45


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9V45 entry

There are 10 chains in PDB entry 9V45 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 164ALA 190
B
 PRO 164ALA 190
C
 PRO 164ALA 190
D
 PRO 164ALA 190
E
 PRO 164ALA 190
F
 PRO 164ALA 190
G
 PRO 164ALA 190
H
 PRO 164ALA 190
I
 PRO 164ALA 190
J
 PRO 164ALA 190
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 9V45

There are 8 sheets in PDB entry 9V45. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
166 171first strand
Strand 2
C
166 171parallel
Strand 3
E
166 171parallel
Strand 4
G
166 171parallel
Strand 5
I
166 171parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
174 176first strand
Strand 2
C
174 176parallel
Strand 3
E
174 176parallel
Strand 4
G
174 176parallel
Strand 5
I
174 176parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
180 182first strand
Strand 2
C
180 182parallel
Strand 3
E
180 182parallel
Strand 4
G
180 182parallel
Strand 5
I
180 182parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
185 189first strand
Strand 2
C
185 189parallel
Strand 3
E
185 189parallel
Strand 4
G
185 189parallel
Strand 5
I
185 189parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
166 171first strand
Strand 2
D
166 171parallel
Strand 3
F
166 171parallel
Strand 4
H
166 171parallel
Strand 5
J
166 171parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
174 176first strand
Strand 2
D
174 176parallel
Strand 3
F
174 176parallel
Strand 4
H
174 176parallel
Strand 5
J
174 176parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
180 182first strand
Strand 2
D
180 182parallel
Strand 3
F
180 182parallel
Strand 4
H
180 182parallel
Strand 5
J
180 182parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
185 188first strand
Strand 2
D
185 188parallel
Strand 3
F
185 188parallel
Strand 4
H
185 188parallel
Strand 5
J
185 188parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il