Analysis of interatomic Contacts of Structural Units in PDB entry:
9V4F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9V4F entry

There are 10 chains in PDB entry 9V4F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 146LEU 171
B
 VAL 146LEU 171
C
 VAL 146LEU 171
D
 VAL 146LEU 171
E
 VAL 146LEU 171
F
 VAL 146LEU 171
G
 VAL 146LEU 171
H
 VAL 146LEU 171
I
 VAL 146LEU 171
J
 VAL 146LEU 171
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 9V4F

There are 4 sheets in PDB entry 9V4F. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
147 148first strand
Strand 2
C
147 148parallel
Strand 3
E
147 148parallel
Strand 4
G
147 148parallel
Strand 5
I
147 148parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
165 170first strand
Strand 2
C
165 170parallel
Strand 3
E
165 170parallel
Strand 4
G
165 170parallel
Strand 5
I
165 170parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
147 148first strand
Strand 2
D
147 148parallel
Strand 3
F
147 148parallel
Strand 4
H
147 148parallel
Strand 5
J
147 148parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
165 170first strand
Strand 2
D
165 170parallel
Strand 3
F
165 170parallel
Strand 4
H
165 170parallel
Strand 5
J
165 170parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il