Analysis of interatomic Contacts of Structural Units in PDB entry:
9V5A


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9V5A entry

There are 2 chains in PDB entry 9V5A (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 3PHE 62
A
 SER 64ALA 220
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 9V5A. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
55 60Right-handed alpha
Helix 2
AA2
A
76 81Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9V5A.

There are 13 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
135 138first strand
Strand 2
A
151 162anti-parallel
Strand 3
A
167 178anti-parallel
Strand 4
A
86 94anti-parallel
Strand 5
A
99 109anti-parallel
Strand 6
A
112 122anti-parallel
Strand 7
A
9 19parallel
Strand 8
A
22 33anti-parallel
Strand 9
A
38 47anti-parallel
Strand 10
A
208 218anti-parallel
Strand 11
A
191 202anti-parallel
Strand 12
A
141 148anti-parallel
Strand 13
A
151 162anti-parallel
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