Analysis of interatomic Contacts of Structural Units in PDB entry:
9V6L

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9V6L entry

There are 16 chains in PDB entry 9V6L (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 30	VAL 466
B	VAL 30	VAL 466
D	CYS 16	ASN 254
E	VAL 30	VAL 466
G	CYS 16	ASN 254
I	VAL 30	VAL 466
K	CYS 16	ASN 254
L	CYS 16	ASN 254
M	VAL 30	VAL 466
O	CYS 16	ASN 254
P	VAL 30	VAL 466
R	CYS 16	ASN 254
S	VAL 30	VAL 466
V	CYS 16	ASN 254
W	VAL 30	VAL 466
Y	CYS 16	ASN 254

There are144 helices in PDB entry 9V6L. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	30	39	Right-handed alpha
Helix 2	AA2	A	54	58	Right-handed 310
Helix 3	AA3	A	79	87	Right-handed alpha
Helix 4	AA4	A	88	103	Right-handed alpha
Helix 5	AA5	A	111	135	Right-handed alpha
Helix 6	AA6	A	145	158	Right-handed alpha
Helix 7	AA7	A	177	197	Right-handed alpha
Helix 8	AA8	A	203	235	Right-handed alpha
Helix 9	AA9	A	238	280	Right-handed alpha
Helix 10	AB1	A	294	316	Right-handed alpha
Helix 11	AB2	A	324	340	Right-handed alpha
Helix 12	AB3	A	355	436	Right-handed alpha
Helix 13	AB4	A	457	465	Right-handed alpha
Helix 14	AB5	B	31	39	Right-handed alpha
Helix 15	AB6	B	54	58	Right-handed 310
Helix 16	AB7	B	79	87	Right-handed alpha
Helix 17	AB8	B	88	103	Right-handed alpha
Helix 18	AB9	B	111	135	Right-handed alpha
Helix 19	AC1	B	145	158	Right-handed alpha
Helix 20	AC2	B	177	197	Right-handed alpha
Helix 21	AC3	B	203	235	Right-handed alpha
Helix 22	AC4	B	238	280	Right-handed alpha
Helix 23	AC5	B	294	316	Right-handed alpha
Helix 24	AC6	B	324	340	Right-handed alpha
Helix 25	AC7	B	355	436	Right-handed alpha
Helix 26	AC8	B	457	465	Right-handed alpha
Helix 27	AC9	D	26	43	Right-handed alpha
Helix 28	AD1	D	104	116	Right-handed alpha
Helix 29	AD2	D	156	164	Right-handed alpha
Helix 30	AD3	D	193	198	Right-handed 310
Helix 31	AD4	D	221	233	Right-handed alpha
Helix 32	AD5	E	31	39	Right-handed alpha
Helix 33	AD6	E	54	58	Right-handed 310
Helix 34	AD7	E	79	87	Right-handed alpha
Helix 35	AD8	E	88	103	Right-handed alpha
Helix 36	AD9	E	111	135	Right-handed alpha
Helix 37	AE1	E	145	158	Right-handed alpha
Helix 38	AE2	E	177	197	Right-handed alpha
Helix 39	AE3	E	203	235	Right-handed alpha
Helix 40	AE4	E	238	280	Right-handed alpha
Helix 41	AE5	E	294	316	Right-handed alpha
Helix 42	AE6	E	324	340	Right-handed alpha
Helix 43	AE7	E	355	436	Right-handed alpha
Helix 44	AE8	E	457	465	Right-handed alpha
Helix 45	AE9	G	26	43	Right-handed alpha
Helix 46	AF1	G	104	116	Right-handed alpha
Helix 47	AF2	G	156	164	Right-handed alpha
Helix 48	AF3	G	193	198	Right-handed 310
Helix 49	AF4	G	221	233	Right-handed alpha
Helix 50	AF5	I	31	39	Right-handed alpha
Helix 51	AF6	I	54	58	Right-handed 310
Helix 52	AF7	I	79	87	Right-handed alpha
Helix 53	AF8	I	88	103	Right-handed alpha
Helix 54	AF9	I	111	135	Right-handed alpha
Helix 55	AG1	I	145	158	Right-handed alpha
Helix 56	AG2	I	177	197	Right-handed alpha
Helix 57	AG3	I	203	235	Right-handed alpha
Helix 58	AG4	I	238	280	Right-handed alpha
Helix 59	AG5	I	294	316	Right-handed alpha
Helix 60	AG6	I	324	340	Right-handed alpha
Helix 61	AG7	I	355	436	Right-handed alpha
Helix 62	AG8	I	457	465	Right-handed alpha
Helix 63	AG9	K	26	43	Right-handed alpha
Helix 64	AH1	K	104	116	Right-handed alpha
Helix 65	AH2	K	156	164	Right-handed alpha
Helix 66	AH3	K	193	198	Right-handed 310
Helix 67	AH4	K	221	233	Right-handed alpha
Helix 68	AH5	L	26	43	Right-handed alpha
Helix 69	AH6	L	104	116	Right-handed alpha
Helix 70	AH7	L	156	164	Right-handed alpha
Helix 71	AH8	L	193	198	Right-handed 310
Helix 72	AH9	L	221	233	Right-handed alpha
Helix 73	AI1	M	31	39	Right-handed alpha
Helix 74	AI2	M	54	58	Right-handed 310
Helix 75	AI3	M	79	87	Right-handed alpha
Helix 76	AI4	M	88	103	Right-handed alpha
Helix 77	AI5	M	111	135	Right-handed alpha
Helix 78	AI6	M	145	158	Right-handed alpha
Helix 79	AI7	M	177	197	Right-handed alpha
Helix 80	AI8	M	203	235	Right-handed alpha
Helix 81	AI9	M	238	280	Right-handed alpha
Helix 82	AJ1	M	294	316	Right-handed alpha
Helix 83	AJ2	M	324	340	Right-handed alpha
Helix 84	AJ3	M	355	436	Right-handed alpha
Helix 85	AJ4	M	457	465	Right-handed alpha
Helix 86	AJ5	O	26	43	Right-handed alpha
Helix 87	AJ6	O	104	116	Right-handed alpha
Helix 88	AJ7	O	156	164	Right-handed alpha
Helix 89	AJ8	O	193	198	Right-handed 310
Helix 90	AJ9	O	221	233	Right-handed alpha
Helix 91	AK1	P	31	39	Right-handed alpha
Helix 92	AK2	P	54	58	Right-handed 310
Helix 93	AK3	P	79	87	Right-handed alpha
Helix 94	AK4	P	88	103	Right-handed alpha
Helix 95	AK5	P	111	135	Right-handed alpha
Helix 96	AK6	P	145	158	Right-handed alpha
Helix 97	AK7	P	177	197	Right-handed alpha
Helix 98	AK8	P	203	235	Right-handed alpha
Helix 99	AK9	P	238	280	Right-handed alpha
Helix 100	AL1	P	294	316	Right-handed alpha
Helix 101	AL2	P	324	340	Right-handed alpha
Helix 102	AL3	P	355	436	Right-handed alpha
Helix 103	AL4	P	457	465	Right-handed alpha
Helix 104	AL5	R	26	43	Right-handed alpha
Helix 105	AL6	R	104	116	Right-handed alpha
Helix 106	AL7	R	156	164	Right-handed alpha
Helix 107	AL8	R	193	198	Right-handed 310
Helix 108	AL9	R	221	233	Right-handed alpha
Helix 109	AM1	S	31	39	Right-handed alpha
Helix 110	AM2	S	54	58	Right-handed 310
Helix 111	AM3	S	79	87	Right-handed alpha
Helix 112	AM4	S	88	103	Right-handed alpha
Helix 113	AM5	S	111	135	Right-handed alpha
Helix 114	AM6	S	145	158	Right-handed alpha
Helix 115	AM7	S	177	197	Right-handed alpha
Helix 116	AM8	S	203	235	Right-handed alpha
Helix 117	AM9	S	238	280	Right-handed alpha
Helix 118	AN1	S	294	316	Right-handed alpha
Helix 119	AN2	S	324	340	Right-handed alpha
Helix 120	AN3	S	355	436	Right-handed alpha
Helix 121	AN4	S	457	465	Right-handed alpha
Helix 122	AN5	V	26	43	Right-handed alpha
Helix 123	AN6	V	104	116	Right-handed alpha
Helix 124	AN7	V	156	164	Right-handed alpha
Helix 125	AN8	V	193	198	Right-handed 310
Helix 126	AN9	V	221	233	Right-handed alpha
Helix 127	AO1	W	31	39	Right-handed alpha
Helix 128	AO2	W	54	58	Right-handed 310
Helix 129	AO3	W	79	87	Right-handed alpha
Helix 130	AO4	W	88	103	Right-handed alpha
Helix 131	AO5	W	111	135	Right-handed alpha
Helix 132	AO6	W	145	158	Right-handed alpha
Helix 133	AO7	W	177	197	Right-handed alpha
Helix 134	AO8	W	203	235	Right-handed alpha
Helix 135	AO9	W	238	280	Right-handed alpha
Helix 136	AP1	W	294	316	Right-handed alpha
Helix 137	AP2	W	324	340	Right-handed alpha
Helix 138	AP3	W	355	436	Right-handed alpha
Helix 139	AP4	W	457	465	Right-handed alpha
Helix 140	AP5	Y	26	43	Right-handed alpha
Helix 141	AP6	Y	104	116	Right-handed alpha
Helix 142	AP7	Y	156	164	Right-handed alpha
Helix 143	AP8	Y	193	198	Right-handed 310
Helix 144	AP9	Y	221	233	Right-handed alpha

There are 34 sheets in PDB entry 9V6L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	159	161	first strand
Strand 2	A	168	175	anti-parallel
Strand 3	A	43	51	anti-parallel
Strand 4	A	441	445	anti-parallel

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There are 17 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	284	293	first strand
Strand 2	A	345	354	anti-parallel
Strand 3	W	284	293	anti-parallel
Strand 4	W	345	354	anti-parallel
Strand 5	S	284	293	anti-parallel
Strand 6	S	345	354	anti-parallel
Strand 7	P	284	293	anti-parallel
Strand 8	P	345	354	anti-parallel
Strand 9	M	284	293	anti-parallel
Strand 10	M	345	354	anti-parallel
Strand 11	I	284	293	anti-parallel
Strand 12	I	345	354	anti-parallel
Strand 13	E	284	293	anti-parallel
Strand 14	E	345	354	anti-parallel
Strand 15	B	284	293	anti-parallel
Strand 16	B	345	354	anti-parallel
Strand 17	A	284	293	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	159	161	first strand
Strand 2	B	168	175	anti-parallel
Strand 3	B	43	51	anti-parallel
Strand 4	B	441	445	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	81	83	first strand
Strand 2	D	55	60	anti-parallel
Strand 3	D	125	131	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	89	92	first strand
Strand 2	D	96	99	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	148	150	first strand
Strand 2	D	136	141	anti-parallel
Strand 3	D	215	218	parallel
Strand 4	D	176	181	anti-parallel
Strand 5	D	187	192	anti-parallel

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There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	243	253	first strand
Strand 2	G	243	253	parallel
Strand 3	L	243	253	parallel
Strand 4	O	243	253	parallel
Strand 5	R	243	253	parallel
Strand 6	V	243	253	parallel
Strand 7	Y	243	253	parallel
Strand 8	K	243	253	parallel
Strand 9	D	243	253	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	159	161	first strand
Strand 2	E	168	175	anti-parallel
Strand 3	E	43	51	anti-parallel
Strand 4	E	441	445	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	81	83	first strand
Strand 2	G	55	60	anti-parallel
Strand 3	G	125	131	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	89	92	first strand
Strand 2	G	96	99	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	148	150	first strand
Strand 2	G	136	141	anti-parallel
Strand 3	G	215	218	parallel
Strand 4	G	176	181	anti-parallel
Strand 5	G	187	192	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	159	161	first strand
Strand 2	I	168	175	anti-parallel
Strand 3	I	43	51	anti-parallel
Strand 4	I	441	445	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	81	83	first strand
Strand 2	K	55	60	anti-parallel
Strand 3	K	125	131	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	89	92	first strand
Strand 2	K	96	99	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	148	150	first strand
Strand 2	K	136	141	anti-parallel
Strand 3	K	215	218	parallel
Strand 4	K	176	181	anti-parallel
Strand 5	K	187	192	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	81	83	first strand
Strand 2	L	55	60	anti-parallel
Strand 3	L	125	131	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	89	92	first strand
Strand 2	L	96	99	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	148	150	first strand
Strand 2	L	136	141	anti-parallel
Strand 3	L	215	218	parallel
Strand 4	L	176	181	anti-parallel
Strand 5	L	187	192	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	159	161	first strand
Strand 2	M	168	175	anti-parallel
Strand 3	M	43	51	anti-parallel
Strand 4	M	441	445	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	81	83	first strand
Strand 2	O	55	60	anti-parallel
Strand 3	O	125	131	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	89	92	first strand
Strand 2	O	96	99	anti-parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	148	150	first strand
Strand 2	O	136	141	anti-parallel
Strand 3	O	215	218	parallel
Strand 4	O	176	181	anti-parallel
Strand 5	O	187	192	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	159	161	first strand
Strand 2	P	168	175	anti-parallel
Strand 3	P	43	51	anti-parallel
Strand 4	P	441	445	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	81	83	first strand
Strand 2	R	55	60	anti-parallel
Strand 3	R	125	131	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	89	92	first strand
Strand 2	R	96	99	anti-parallel

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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	148	150	first strand
Strand 2	R	136	141	anti-parallel
Strand 3	R	215	218	parallel
Strand 4	R	176	181	anti-parallel
Strand 5	R	187	192	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	159	161	first strand
Strand 2	S	168	175	anti-parallel
Strand 3	S	43	51	anti-parallel
Strand 4	S	441	445	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	81	83	first strand
Strand 2	V	55	60	anti-parallel
Strand 3	V	125	131	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	89	92	first strand
Strand 2	V	96	99	anti-parallel

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There are 5 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	148	150	first strand
Strand 2	V	136	141	anti-parallel
Strand 3	V	215	218	parallel
Strand 4	V	176	181	anti-parallel
Strand 5	V	187	192	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	159	161	first strand
Strand 2	W	168	175	anti-parallel
Strand 3	W	43	51	anti-parallel
Strand 4	W	441	445	anti-parallel

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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Y	81	83	first strand
Strand 2	Y	55	60	anti-parallel
Strand 3	Y	125	131	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Y	89	92	first strand
Strand 2	Y	96	99	anti-parallel

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There are 5 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Y	148	150	first strand
Strand 2	Y	136	141	anti-parallel
Strand 3	Y	215	218	parallel
Strand 4	Y	176	181	anti-parallel
Strand 5	Y	187	192	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9V6L

Analysis of interatomic Contacts of Structural Units in PDB entry:
9V6L