Analysis of interatomic Contacts of Structural Units in PDB entry:
9V77


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9V77 entry

There are 2 chains in PDB entry 9V77 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 16TRP 250
B
 GLY 16TRP 250
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 9V77. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
29 32Right-handed 310
Helix 2
AA2
A
33 42Right-handed alpha
Helix 3
AA3
A
60 65Right-handed alpha
Helix 4
AA4
A
67 86Right-handed alpha
Helix 5
AA5
A
96 108Right-handed alpha
Helix 6
AA6
A
129 145Right-handed alpha
Helix 7
AA7
A
148 179Right-handed alpha
Helix 8
AA8
A
180 184Right-handed 310
Helix 9
AA9
A
200 202Right-handed 310
Helix 10
AB1
A
203 209Right-handed alpha
Helix 11
AB2
A
233 246Right-handed alpha
Helix 12
AB3
B
29 32Right-handed 310
Helix 13
AB4
B
33 43Right-handed alpha
Helix 14
AB5
B
60 65Right-handed alpha
Helix 15
AB6
B
67 84Right-handed alpha
Helix 16
AB7
B
96 108Right-handed alpha
Helix 17
AB8
B
129 145Right-handed alpha
Helix 18
AB9
B
148 180Right-handed alpha
Helix 19
AC1
B
181 184Right-handed 310
Helix 20
AC2
B
200 202Right-handed 310
Helix 21
AC3
B
203 209Right-handed alpha
Helix 22
AC4
B
233 247Right-handed alpha
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There are 2 sheets in PDB entry 9V77. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 48first strand
Strand 2
A
19 23parallel
Strand 3
A
90 95parallel
Strand 4
A
113 119parallel
Strand 5
A
188 193parallel
Strand 6
A
216 221parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
46 48first strand
Strand 2
B
19 23parallel
Strand 3
B
90 94parallel
Strand 4
B
113 119parallel
Strand 5
B
188 193parallel
Strand 6
B
216 221parallel
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