Analysis of interatomic Contacts of Structural Units in PDB entry:
9V8Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9V8Y entry

There is 1 chain in PDB entry 9V8Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 56LEU 581
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 9V8Y. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
65 70Right-handed alpha
Helix 2
AA2
A
71 76Right-handed alpha
Helix 3
AA3
A
77 85Right-handed alpha
Helix 4
AA4
A
91 99Right-handed alpha
Helix 5
AA5
A
102 116Right-handed alpha
Helix 6
AA6
A
129 131Right-handed 310
Helix 7
AA7
A
132 144Right-handed alpha
Helix 8
AA8
A
147 162Right-handed alpha
Helix 9
AA9
A
208 217Right-handed alpha
Helix 10
AB1
A
234 239Right-handed alpha
Helix 11
AB2
A
240 248Right-handed alpha
Helix 12
AB3
A
262 271Right-handed alpha
Helix 13
AB4
A
272 274Right-handed 310
Helix 14
AB5
A
286 294Right-handed alpha
Helix 15
AB6
A
296 302Right-handed 310
Helix 16
AB7
A
303 317Right-handed alpha
Helix 17
AB8
A
337 371Right-handed alpha
Helix 18
AB9
A
387 393Right-handed alpha
Helix 19
AC1
A
398 430Right-handed alpha
Helix 20
AC2
A
445 457Right-handed alpha
Helix 21
AC3
A
458 461Right-handed 310
Helix 22
AC4
A
466 477Right-handed alpha
Helix 23
AC5
A
480 490Right-handed alpha
Helix 24
AC6
A
499 508Right-handed alpha
Helix 25
AC7
A
518 523Right-handed 310
Helix 26
AC8
A
526 541Right-handed alpha
Helix 27
AC9
A
548 550Right-handed 310
Helix 28
AD1
A
556 570Right-handed alpha
Helix 29
AD2
A
574 581Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9V8Y.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
546 547first strand
Strand 2
A
551 552anti-parallel
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