Analysis of interatomic Contacts of Structural Units in PDB entry:
9VH3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9VH3 entry

There is 1 chain in PDB entry 9VH3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 26ASN 599
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 9VH3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
26 38Right-handed alpha
Helix 2
AA2
A
60 64Right-handed 310
Helix 3
AA3
A
80 86Right-handed 310
Helix 4
AA4
A
104 110Right-handed 310
Helix 5
AA5
A
130 134Right-handed 310
Helix 6
AA6
A
153 159Right-handed 310
Helix 7
AA7
A
177 183Right-handed 310
Helix 8
AA8
A
203 209Right-handed 310
Helix 9
AA9
A
227 232Right-handed alpha
Helix 10
AB1
A
254 258Right-handed 310
Helix 11
AB2
A
299 305Right-handed 310
Helix 12
AB3
A
323 329Right-handed 310
Helix 13
AB4
A
395 401Right-handed 310
Helix 14
AB5
A
419 423Right-handed 310
Helix 15
AB6
A
465 471Right-handed 310
Helix 16
AB7
A
489 495Right-handed 310
Helix 17
AB8
A
537 543Right-handed 310
Helix 18
AB9
A
561 567Right-handed alpha
Helix 19
AC1
A
589 593Right-handed 310
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There are 6 sheets in PDB entry 9VH3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 21 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
67 69first strand
Strand 2
A
91 93parallel
Strand 3
A
115 117parallel
Strand 4
A
140 142parallel
Strand 5
A
164 166parallel
Strand 6
A
188 190parallel
Strand 7
A
214 216parallel
Strand 8
A
239 241parallel
Strand 9
A
263 265parallel
Strand 10
A
286 288parallel
Strand 11
A
310 312parallel
Strand 12
A
334 336parallel
Strand 13
A
358 360parallel
Strand 14
A
382 384parallel
Strand 15
A
406 408parallel
Strand 16
A
430 432parallel
Strand 17
A
452 454parallel
Strand 18
A
476 478parallel
Strand 19
A
500 502parallel
Strand 20
A
524 526parallel
Strand 21
A
548 550parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
76 77first strand
Strand 2
A
98 101parallel
Strand 3
A
122 126parallel
Strand 4
A
147 149parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
200 201first strand
Strand 2
A
222 223parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
248 250first strand
Strand 2
A
270 272parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
391 393first strand
Strand 2
A
413 415parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
461 463first strand
Strand 2
A
483 487parallel
Strand 3
A
507 509parallel
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