Analysis of interatomic Contacts of Structural Units in PDB entry:
9VI7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9VI7 entry

There are 2 chains in PDB entry 9VI7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 45HIS 370
B
 LEU 47HIS 369
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 9VI7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
45 60Right-handed alpha
Helix 2
AA2
A
61 64Right-handed 310
Helix 3
AA3
A
77 79Right-handed 310
Helix 4
AA4
A
101 116Right-handed alpha
Helix 5
AA5
A
119 123Right-handed 310
Helix 6
AA6
A
154 169Right-handed alpha
Helix 7
AA7
A
190 211Right-handed alpha
Helix 8
AA8
A
213 226Right-handed alpha
Helix 9
AA9
A
247 256Right-handed alpha
Helix 10
AB1
A
263 269Right-handed alpha
Helix 11
AB2
A
269 287Right-handed alpha
Helix 12
AB3
A
294 309Right-handed alpha
Helix 13
AB4
A
309 318Right-handed alpha
Helix 14
AB5
A
320 330Right-handed alpha
Helix 15
AB6
A
332 344Right-handed alpha
Helix 16
AB7
A
346 369Right-handed alpha
Helix 17
AB8
B
48 60Right-handed alpha
Helix 18
AB9
B
61 64Right-handed 310
Helix 19
AC1
B
77 79Right-handed 310
Helix 20
AC2
B
101 116Right-handed alpha
Helix 21
AC3
B
154 169Right-handed alpha
Helix 22
AC4
B
190 211Right-handed alpha
Helix 23
AC5
B
213 226Right-handed alpha
Helix 24
AC6
B
247 256Right-handed alpha
Helix 25
AC7
B
263 269Right-handed alpha
Helix 26
AC8
B
269 287Right-handed alpha
Helix 27
AC9
B
294 309Right-handed alpha
Helix 28
AD1
B
309 316Right-handed alpha
Helix 29
AD2
B
320 331Right-handed alpha
Helix 30
AD3
B
332 344Right-handed alpha
Helix 31
AD4
B
346 364Right-handed alpha
Helix 32
AD5
B
365 368Right-handed 310
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There are 2 sheets in PDB entry 9VI7. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
71 76first strand
Strand 2
A
81 86anti-parallel
Strand 3
A
91 96anti-parallel
Strand 4
A
178 186anti-parallel
Strand 5
A
171 175anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
71 76first strand
Strand 2
B
81 86anti-parallel
Strand 3
B
91 96anti-parallel
Strand 4
B
178 186anti-parallel
Strand 5
B
171 175anti-parallel
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