Analysis of interatomic Contacts of Structural Units in PDB entry:
9VIM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9VIM entry

There are 4 chains in PDB entry 9VIM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 8LYS 701
B
 ALA 8LYS 701
C
 ALA 8LYS 701
D
 ALA 8LYS 701
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are130 helices in PDB entry 9VIM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
42 52Right-handed alpha
Helix 2
AA2
A
55 71Right-handed alpha
Helix 3
AA3
A
92 102Right-handed alpha
Helix 4
AA4
A
109 117Right-handed alpha
Helix 5
AA5
A
120 125Right-handed alpha
Helix 6
AA6
A
130 136Right-handed alpha
Helix 7
AA7
A
137 145Right-handed alpha
Helix 8
AA8
A
154 159Right-handed alpha
Helix 9
AA9
A
167 197Right-handed alpha
Helix 10
AB1
A
201 206Right-handed alpha
Helix 11
AB2
A
206 218Right-handed alpha
Helix 12
AB3
A
225 247Right-handed alpha
Helix 13
AB4
A
256 266Right-handed alpha
Helix 14
AB5
A
273 277Right-handed 310
Helix 15
AB6
A
303 313Right-handed alpha
Helix 16
AB7
A
320 329Right-handed alpha
Helix 17
AB8
A
338 343Right-handed 310
Helix 18
AB9
A
345 347Right-handed 310
Helix 19
AC1
A
348 353Right-handed alpha
Helix 20
AC2
A
369 374Right-handed alpha
Helix 21
AC3
A
377 387Right-handed alpha
Helix 22
AC4
A
391 405Right-handed alpha
Helix 23
AC5
A
406 422Right-handed alpha
Helix 24
AC6
A
437 452Right-handed alpha
Helix 25
AC7
A
456 462Right-handed alpha
Helix 26
AC8
A
464 471Right-handed alpha
Helix 27
AC9
A
479 485Right-handed alpha
Helix 28
AD1
A
496 502Right-handed alpha
Helix 29
AD2
A
504 516Right-handed alpha
Helix 30
AD3
A
516 521Right-handed alpha
Helix 31
AD4
A
524 529Right-handed alpha
Helix 32
AD5
A
532 539Right-handed alpha
Helix 33
AD6
A
547 554Right-handed alpha
Helix 34
AD7
A
586 591Right-handed alpha
Helix 35
AD8
A
591 596Right-handed alpha
Helix 36
AD9
A
599 603Right-handed 310
Helix 37
AE1
A
609 616Right-handed alpha
Helix 38
AE2
A
622 639Right-handed alpha
Helix 39
AE3
A
646 652Right-handed alpha
Helix 40
AE4
A
652 664Right-handed alpha
Helix 41
AE5
A
666 687Right-handed alpha
Helix 42
AE6
A
687 700Right-handed alpha
Helix 43
AE7
B
42 51Right-handed alpha
Helix 44
AE8
B
56 72Right-handed alpha
Helix 45
AE9
B
109 118Right-handed alpha
Helix 46
AF1
B
120 125Right-handed alpha
Helix 47
AF2
B
127 147Right-handed alpha
Helix 48
AF3
B
155 161Right-handed alpha
Helix 49
AF4
B
166 196Right-handed alpha
Helix 50
AF5
B
206 218Right-handed alpha
Helix 51
AF6
B
223 244Right-handed alpha
Helix 52
AF7
B
253 266Right-handed alpha
Helix 53
AF8
B
289 293Right-handed 310
Helix 54
AF9
B
299 319Right-handed alpha
Helix 55
AG1
B
321 327Right-handed alpha
Helix 56
AG2
B
331 364Right-handed alpha
Helix 57
AG3
B
377 382Right-handed alpha
Helix 58
AG4
B
382 387Right-handed alpha
Helix 59
AG5
B
388 404Right-handed alpha
Helix 60
AG6
B
406 420Right-handed alpha
Helix 61
AG7
B
434 451Right-handed alpha
Helix 62
AG8
B
453 458Right-handed alpha
Helix 63
AG9
B
464 476Right-handed alpha
Helix 64
AH1
B
480 489Right-handed alpha
Helix 65
AH2
B
493 516Right-handed alpha
Helix 66
AH3
B
530 556Right-handed alpha
Helix 67
AH4
B
623 639Right-handed alpha
Helix 68
AH5
B
646 652Right-handed alpha
Helix 69
AH6
B
652 665Right-handed alpha
Helix 70
AH7
B
666 684Right-handed alpha
Helix 71
AH8
B
687 701Right-handed alpha
Helix 72
AH9
C
42 51Right-handed alpha
Helix 73
AI1
C
56 72Right-handed alpha
Helix 74
AI2
C
95 100Right-handed alpha
Helix 75
AI3
C
109 118Right-handed alpha
Helix 76
AI4
C
120 125Right-handed alpha
Helix 77
AI5
C
127 147Right-handed alpha
Helix 78
AI6
C
153 161Right-handed alpha
Helix 79
AI7
C
167 196Right-handed alpha
Helix 80
AI8
C
206 218Right-handed alpha
Helix 81
AI9
C
223 247Right-handed alpha
Helix 82
AJ1
C
253 266Right-handed alpha
Helix 83
AJ2
C
289 293Right-handed 310
Helix 84
AJ3
C
299 319Right-handed alpha
Helix 85
AJ4
C
321 327Right-handed alpha
Helix 86
AJ5
C
331 364Right-handed alpha
Helix 87
AJ6
C
377 387Right-handed alpha
Helix 88
AJ7
C
388 404Right-handed alpha
Helix 89
AJ8
C
406 420Right-handed alpha
Helix 90
AJ9
C
434 458Right-handed alpha
Helix 91
AK1
C
464 476Right-handed alpha
Helix 92
AK2
C
480 489Right-handed alpha
Helix 93
AK3
C
493 516Right-handed alpha
Helix 94
AK4
C
530 547Right-handed alpha
Helix 95
AK5
C
623 639Right-handed alpha
Helix 96
AK6
C
646 652Right-handed alpha
Helix 97
AK7
C
652 665Right-handed alpha
Helix 98
AK8
C
666 684Right-handed alpha
Helix 99
AK9
C
687 694Right-handed alpha
Helix 100
AL1
C
694 701Right-handed alpha
Helix 101
AL2
D
42 51Right-handed alpha
Helix 102
AL3
D
56 72Right-handed alpha
Helix 103
AL4
D
95 100Right-handed alpha
Helix 104
AL5
D
109 118Right-handed alpha
Helix 105
AL6
D
120 125Right-handed alpha
Helix 106
AL7
D
127 147Right-handed alpha
Helix 107
AL8
D
153 161Right-handed alpha
Helix 108
AL9
D
167 187Right-handed alpha
Helix 109
AM1
D
187 196Right-handed alpha
Helix 110
AM2
D
206 218Right-handed alpha
Helix 111
AM3
D
223 246Right-handed alpha
Helix 112
AM4
D
253 266Right-handed alpha
Helix 113
AM5
D
289 293Right-handed 310
Helix 114
AM6
D
299 319Right-handed alpha
Helix 115
AM7
D
321 327Right-handed alpha
Helix 116
AM8
D
331 364Right-handed alpha
Helix 117
AM9
D
369 375Right-handed alpha
Helix 118
AN1
D
377 387Right-handed alpha
Helix 119
AN2
D
388 404Right-handed alpha
Helix 120
AN3
D
406 420Right-handed alpha
Helix 121
AN4
D
434 458Right-handed alpha
Helix 122
AN5
D
464 476Right-handed alpha
Helix 123
AN6
D
480 489Right-handed alpha
Helix 124
AN7
D
493 516Right-handed alpha
Helix 125
AN8
D
530 547Right-handed alpha
Helix 126
AN9
D
623 639Right-handed alpha
Helix 127
AO1
D
646 652Right-handed alpha
Helix 128
AO2
D
652 665Right-handed alpha
Helix 129
AO3
D
666 684Right-handed alpha
Helix 130
AO4
D
687 701Right-handed alpha
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There are no sheets in PDB entry 9VIM
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