Analysis of interatomic Contacts of Structural Units in PDB entry:
9VIW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9VIW entry

There are 4 chains in PDB entry 9VIW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 2ILE 289
B
 ASN 2PHE 287
D
 ASN 2GLY 291
C
 ASN 2THR 288
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 9VIW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 31Right-handed alpha
Helix 2
AA2
A
33 61Right-handed alpha
Helix 3
AA3
A
70 74Right-handed 310
Helix 4
AA4
A
80 106Right-handed alpha
Helix 5
AA5
A
108 139Right-handed alpha
Helix 6
AA6
A
153 181Right-handed alpha
Helix 7
AA7
A
183 211Right-handed alpha
Helix 8
AA8
A
228 252Right-handed alpha
Helix 9
AA9
A
256 287Right-handed alpha
Helix 10
AB1
B
3 31Right-handed alpha
Helix 11
AB2
B
33 61Right-handed alpha
Helix 12
AB3
B
70 74Right-handed 310
Helix 13
AB4
B
80 106Right-handed alpha
Helix 14
AB5
B
108 137Right-handed alpha
Helix 15
AB6
B
153 181Right-handed alpha
Helix 16
AB7
B
183 211Right-handed alpha
Helix 17
AB8
B
228 254Right-handed alpha
Helix 18
AB9
B
256 285Right-handed alpha
Helix 19
AC1
D
3 31Right-handed alpha
Helix 20
AC2
D
33 61Right-handed alpha
Helix 21
AC3
D
70 74Right-handed 310
Helix 22
AC4
D
80 106Right-handed alpha
Helix 23
AC5
D
108 137Right-handed alpha
Helix 24
AC6
D
154 181Right-handed alpha
Helix 25
AC7
D
183 211Right-handed alpha
Helix 26
AC8
D
228 252Right-handed alpha
Helix 27
AC9
D
256 288Right-handed alpha
Helix 28
AD1
C
3 31Right-handed alpha
Helix 29
AD2
C
33 61Right-handed alpha
Helix 30
AD3
C
70 74Right-handed 310
Helix 31
AD4
C
80 106Right-handed alpha
Helix 32
AD5
C
108 137Right-handed alpha
Helix 33
AD6
C
154 181Right-handed alpha
Helix 34
AD7
C
183 211Right-handed alpha
Helix 35
AD8
C
228 254Right-handed alpha
Helix 36
AD9
C
256 285Right-handed alpha
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There are no sheets in PDB entry 9VIW
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il