Analysis of interatomic Contacts of Structural Units in PDB entry:
9VKN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9VKN entry

There are 2 chains in PDB entry 9VKN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 84LEU 229
B
 LEU 86LEU 229
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 9VKN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
88 114Right-handed alpha
Helix 2
AA2
A
115 131Right-handed alpha
Helix 3
AA3
A
138 153Right-handed alpha
Helix 4
AA4
A
156 166Right-handed alpha
Helix 5
AA5
A
166 182Right-handed alpha
Helix 6
AA6
A
186 204Right-handed alpha
Helix 7
AA7
A
206 225Right-handed alpha
Helix 8
AA8
B
88 114Right-handed alpha
Helix 9
AA9
B
115 132Right-handed alpha
Helix 10
AB1
B
138 154Right-handed alpha
Helix 11
AB2
B
156 166Right-handed alpha
Helix 12
AB3
B
166 183Right-handed alpha
Helix 13
AB4
B
186 205Right-handed alpha
Helix 14
AB5
B
206 225Right-handed alpha
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There are no sheets in PDB entry 9VKN
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