Analysis of interatomic Contacts of Structural Units in PDB entry:
9VQX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9VQX entry

There are 4 chains in PDB entry 9VQX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1MET 790
B
 MET 1MET 790
C
 MET 1MET 790
D
 MET 1MET 790
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are164 helices in PDB entry 9VQX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 14Right-handed alpha
Helix 2
AA2
A
20 31Right-handed alpha
Helix 3
AA3
A
32 46Right-handed alpha
Helix 4
AA4
A
60 68Right-handed alpha
Helix 5
AA5
A
70 80Right-handed alpha
Helix 6
AA6
A
87 94Right-handed alpha
Helix 7
AA7
A
96 108Right-handed alpha
Helix 8
AA8
A
134 143Right-handed alpha
Helix 9
AA9
A
144 154Right-handed alpha
Helix 10
AB1
A
168 178Right-handed alpha
Helix 11
AB2
A
178 194Right-handed alpha
Helix 12
AB3
A
195 203Right-handed alpha
Helix 13
AB4
A
205 224Right-handed alpha
Helix 14
AB5
A
227 247Right-handed alpha
Helix 15
AB6
A
251 260Right-handed alpha
Helix 16
AB7
A
276 285Right-handed alpha
Helix 17
AB8
A
287 292Right-handed alpha
Helix 18
AB9
A
293 305Right-handed alpha
Helix 19
AC1
A
315 329Right-handed alpha
Helix 20
AC2
A
329 340Right-handed alpha
Helix 21
AC3
A
344 348Right-handed 310
Helix 22
AC4
A
351 374Right-handed alpha
Helix 23
AC5
A
408 432Right-handed alpha
Helix 24
AC6
A
433 438Right-handed alpha
Helix 25
AC7
A
440 472Right-handed alpha
Helix 26
AC8
A
481 485Right-handed 310
Helix 27
AC9
A
489 507Right-handed alpha
Helix 28
AD1
A
507 513Right-handed alpha
Helix 29
AD2
A
514 516Right-handed 310
Helix 30
AD3
A
519 528Right-handed alpha
Helix 31
AD4
A
529 566Right-handed alpha
Helix 32
AD5
A
588 594Right-handed 310
Helix 33
AD6
A
595 606Right-handed alpha
Helix 34
AD7
A
607 609Right-handed 310
Helix 35
AD8
A
612 617Right-handed 310
Helix 36
AD9
A
622 641Right-handed alpha
Helix 37
AE1
A
642 661Right-handed alpha
Helix 38
AE2
A
662 677Right-handed alpha
Helix 39
AE3
A
686 691Right-handed alpha
Helix 40
AE4
A
727 759Right-handed alpha
Helix 41
AE5
A
763 783Right-handed alpha
Helix 42
AE6
B
2 14Right-handed alpha
Helix 43
AE7
B
20 31Right-handed alpha
Helix 44
AE8
B
32 46Right-handed alpha
Helix 45
AE9
B
60 68Right-handed alpha
Helix 46
AF1
B
70 80Right-handed alpha
Helix 47
AF2
B
87 94Right-handed alpha
Helix 48
AF3
B
96 108Right-handed alpha
Helix 49
AF4
B
134 143Right-handed alpha
Helix 50
AF5
B
144 154Right-handed alpha
Helix 51
AF6
B
168 178Right-handed alpha
Helix 52
AF7
B
178 194Right-handed alpha
Helix 53
AF8
B
195 203Right-handed alpha
Helix 54
AF9
B
205 224Right-handed alpha
Helix 55
AG1
B
227 247Right-handed alpha
Helix 56
AG2
B
251 260Right-handed alpha
Helix 57
AG3
B
276 285Right-handed alpha
Helix 58
AG4
B
287 292Right-handed alpha
Helix 59
AG5
B
293 305Right-handed alpha
Helix 60
AG6
B
315 329Right-handed alpha
Helix 61
AG7
B
329 340Right-handed alpha
Helix 62
AG8
B
344 348Right-handed 310
Helix 63
AG9
B
351 374Right-handed alpha
Helix 64
AH1
B
408 432Right-handed alpha
Helix 65
AH2
B
433 438Right-handed alpha
Helix 66
AH3
B
440 472Right-handed alpha
Helix 67
AH4
B
481 485Right-handed 310
Helix 68
AH5
B
489 507Right-handed alpha
Helix 69
AH6
B
507 513Right-handed alpha
Helix 70
AH7
B
514 516Right-handed 310
Helix 71
AH8
B
519 528Right-handed alpha
Helix 72
AH9
B
529 566Right-handed alpha
Helix 73
AI1
B
588 594Right-handed 310
Helix 74
AI2
B
595 606Right-handed alpha
Helix 75
AI3
B
607 609Right-handed 310
Helix 76
AI4
B
612 617Right-handed 310
Helix 77
AI5
B
622 641Right-handed alpha
Helix 78
AI6
B
642 661Right-handed alpha
Helix 79
AI7
B
662 677Right-handed alpha
Helix 80
AI8
B
686 691Right-handed alpha
Helix 81
AI9
B
727 759Right-handed alpha
Helix 82
AJ1
B
763 783Right-handed alpha
Helix 83
AJ2
C
2 14Right-handed alpha
Helix 84
AJ3
C
20 31Right-handed alpha
Helix 85
AJ4
C
32 46Right-handed alpha
Helix 86
AJ5
C
60 68Right-handed alpha
Helix 87
AJ6
C
70 80Right-handed alpha
Helix 88
AJ7
C
87 94Right-handed alpha
Helix 89
AJ8
C
96 108Right-handed alpha
Helix 90
AJ9
C
134 143Right-handed alpha
Helix 91
AK1
C
144 154Right-handed alpha
Helix 92
AK2
C
168 178Right-handed alpha
Helix 93
AK3
C
178 194Right-handed alpha
Helix 94
AK4
C
195 203Right-handed alpha
Helix 95
AK5
C
205 224Right-handed alpha
Helix 96
AK6
C
227 247Right-handed alpha
Helix 97
AK7
C
251 260Right-handed alpha
Helix 98
AK8
C
276 285Right-handed alpha
Helix 99
AK9
C
287 292Right-handed alpha
Helix 100
AL1
C
293 305Right-handed alpha
Helix 101
AL2
C
315 329Right-handed alpha
Helix 102
AL3
C
329 340Right-handed alpha
Helix 103
AL4
C
344 348Right-handed 310
Helix 104
AL5
C
351 374Right-handed alpha
Helix 105
AL6
C
408 432Right-handed alpha
Helix 106
AL7
C
433 438Right-handed alpha
Helix 107
AL8
C
440 472Right-handed alpha
Helix 108
AL9
C
481 485Right-handed 310
Helix 109
AM1
C
489 507Right-handed alpha
Helix 110
AM2
C
507 513Right-handed alpha
Helix 111
AM3
C
514 516Right-handed 310
Helix 112
AM4
C
519 528Right-handed alpha
Helix 113
AM5
C
529 566Right-handed alpha
Helix 114
AM6
C
588 594Right-handed 310
Helix 115
AM7
C
595 606Right-handed alpha
Helix 116
AM8
C
607 609Right-handed 310
Helix 117
AM9
C
612 617Right-handed 310
Helix 118
AN1
C
622 641Right-handed alpha
Helix 119
AN2
C
642 661Right-handed alpha
Helix 120
AN3
C
662 677Right-handed alpha
Helix 121
AN4
C
686 691Right-handed alpha
Helix 122
AN5
C
727 759Right-handed alpha
Helix 123
AN6
C
763 783Right-handed alpha
Helix 124
AN7
D
2 14Right-handed alpha
Helix 125
AN8
D
20 31Right-handed alpha
Helix 126
AN9
D
32 46Right-handed alpha
Helix 127
AO1
D
60 68Right-handed alpha
Helix 128
AO2
D
70 80Right-handed alpha
Helix 129
AO3
D
87 94Right-handed alpha
Helix 130
AO4
D
96 108Right-handed alpha
Helix 131
AO5
D
134 143Right-handed alpha
Helix 132
AO6
D
144 154Right-handed alpha
Helix 133
AO7
D
168 178Right-handed alpha
Helix 134
AO8
D
178 194Right-handed alpha
Helix 135
AO9
D
195 203Right-handed alpha
Helix 136
AP1
D
205 224Right-handed alpha
Helix 137
AP2
D
227 247Right-handed alpha
Helix 138
AP3
D
251 260Right-handed alpha
Helix 139
AP4
D
276 285Right-handed alpha
Helix 140
AP5
D
287 292Right-handed alpha
Helix 141
AP6
D
293 305Right-handed alpha
Helix 142
AP7
D
315 329Right-handed alpha
Helix 143
AP8
D
329 340Right-handed alpha
Helix 144
AP9
D
344 348Right-handed 310
Helix 145
AQ1
D
351 374Right-handed alpha
Helix 146
AQ2
D
408 432Right-handed alpha
Helix 147
AQ3
D
433 438Right-handed alpha
Helix 148
AQ4
D
440 472Right-handed alpha
Helix 149
AQ5
D
481 485Right-handed 310
Helix 150
AQ6
D
489 507Right-handed alpha
Helix 151
AQ7
D
507 513Right-handed alpha
Helix 152
AQ8
D
514 516Right-handed 310
Helix 153
AQ9
D
519 528Right-handed alpha
Helix 154
AR1
D
529 566Right-handed alpha
Helix 155
AR2
D
588 594Right-handed 310
Helix 156
AR3
D
595 606Right-handed alpha
Helix 157
AR4
D
607 609Right-handed 310
Helix 158
AR5
D
612 617Right-handed 310
Helix 159
AR6
D
622 641Right-handed alpha
Helix 160
AR7
D
642 661Right-handed alpha
Helix 161
AR8
D
662 677Right-handed alpha
Helix 162
AR9
D
686 691Right-handed alpha
Helix 163
AS1
D
727 759Right-handed alpha
Helix 164
AS2
D
763 783Right-handed alpha
Back to top of page
There are no sheets in PDB entry 9VQX
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il