Analysis of interatomic Contacts of Structural Units in PDB entry:
9VQY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9VQY entry

There are 4 chains in PDB entry 9VQY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 7ASN 793
B
 THR 7ASN 793
C
 THR 7ASN 793
D
 THR 7ASN 793
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are160 helices in PDB entry 9VQY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
9 14Right-handed 310
Helix 2
AA2
A
18 31Right-handed alpha
Helix 3
AA3
A
32 47Right-handed alpha
Helix 4
AA4
A
60 68Right-handed alpha
Helix 5
AA5
A
70 80Right-handed alpha
Helix 6
AA6
A
86 94Right-handed alpha
Helix 7
AA7
A
96 108Right-handed alpha
Helix 8
AA8
A
134 143Right-handed alpha
Helix 9
AA9
A
144 154Right-handed alpha
Helix 10
AB1
A
168 178Right-handed alpha
Helix 11
AB2
A
179 194Right-handed alpha
Helix 12
AB3
A
195 202Right-handed alpha
Helix 13
AB4
A
205 224Right-handed alpha
Helix 14
AB5
A
227 248Right-handed alpha
Helix 15
AB6
A
251 261Right-handed alpha
Helix 16
AB7
A
276 285Right-handed alpha
Helix 17
AB8
A
287 292Right-handed alpha
Helix 18
AB9
A
293 305Right-handed alpha
Helix 19
AC1
A
315 329Right-handed alpha
Helix 20
AC2
A
329 340Right-handed alpha
Helix 21
AC3
A
351 371Right-handed alpha
Helix 22
AC4
A
408 432Right-handed alpha
Helix 23
AC5
A
436 439Right-handed 310
Helix 24
AC6
A
440 474Right-handed alpha
Helix 25
AC7
A
481 485Right-handed 310
Helix 26
AC8
A
489 506Right-handed alpha
Helix 27
AC9
A
507 513Right-handed alpha
Helix 28
AD1
A
514 516Right-handed 310
Helix 29
AD2
A
519 529Right-handed alpha
Helix 30
AD3
A
529 556Right-handed alpha
Helix 31
AD4
A
557 564Right-handed alpha
Helix 32
AD5
A
595 605Right-handed alpha
Helix 33
AD6
A
606 608Right-handed 310
Helix 34
AD7
A
613 618Right-handed alpha
Helix 35
AD8
A
622 642Right-handed alpha
Helix 36
AD9
A
643 660Right-handed alpha
Helix 37
AE1
A
662 677Right-handed alpha
Helix 38
AE2
A
686 690Right-handed 310
Helix 39
AE3
A
730 759Right-handed alpha
Helix 40
AE4
A
763 789Right-handed alpha
Helix 41
AE5
B
9 14Right-handed 310
Helix 42
AE6
B
18 31Right-handed alpha
Helix 43
AE7
B
32 47Right-handed alpha
Helix 44
AE8
B
60 68Right-handed alpha
Helix 45
AE9
B
70 80Right-handed alpha
Helix 46
AF1
B
86 94Right-handed alpha
Helix 47
AF2
B
96 108Right-handed alpha
Helix 48
AF3
B
134 143Right-handed alpha
Helix 49
AF4
B
144 154Right-handed alpha
Helix 50
AF5
B
168 178Right-handed alpha
Helix 51
AF6
B
179 194Right-handed alpha
Helix 52
AF7
B
195 202Right-handed alpha
Helix 53
AF8
B
205 224Right-handed alpha
Helix 54
AF9
B
227 248Right-handed alpha
Helix 55
AG1
B
251 261Right-handed alpha
Helix 56
AG2
B
276 285Right-handed alpha
Helix 57
AG3
B
287 292Right-handed alpha
Helix 58
AG4
B
293 305Right-handed alpha
Helix 59
AG5
B
315 329Right-handed alpha
Helix 60
AG6
B
329 340Right-handed alpha
Helix 61
AG7
B
351 371Right-handed alpha
Helix 62
AG8
B
408 432Right-handed alpha
Helix 63
AG9
B
436 439Right-handed 310
Helix 64
AH1
B
440 474Right-handed alpha
Helix 65
AH2
B
481 485Right-handed 310
Helix 66
AH3
B
489 506Right-handed alpha
Helix 67
AH4
B
507 513Right-handed alpha
Helix 68
AH5
B
514 516Right-handed 310
Helix 69
AH6
B
519 529Right-handed alpha
Helix 70
AH7
B
529 556Right-handed alpha
Helix 71
AH8
B
557 564Right-handed alpha
Helix 72
AH9
B
595 605Right-handed alpha
Helix 73
AI1
B
606 608Right-handed 310
Helix 74
AI2
B
613 618Right-handed alpha
Helix 75
AI3
B
622 642Right-handed alpha
Helix 76
AI4
B
643 660Right-handed alpha
Helix 77
AI5
B
662 677Right-handed alpha
Helix 78
AI6
B
686 690Right-handed 310
Helix 79
AI7
B
730 759Right-handed alpha
Helix 80
AI8
B
763 789Right-handed alpha
Helix 81
AI9
C
9 14Right-handed 310
Helix 82
AJ1
C
18 31Right-handed alpha
Helix 83
AJ2
C
32 47Right-handed alpha
Helix 84
AJ3
C
60 68Right-handed alpha
Helix 85
AJ4
C
70 80Right-handed alpha
Helix 86
AJ5
C
86 94Right-handed alpha
Helix 87
AJ6
C
96 108Right-handed alpha
Helix 88
AJ7
C
134 143Right-handed alpha
Helix 89
AJ8
C
144 154Right-handed alpha
Helix 90
AJ9
C
168 178Right-handed alpha
Helix 91
AK1
C
179 194Right-handed alpha
Helix 92
AK2
C
195 202Right-handed alpha
Helix 93
AK3
C
205 224Right-handed alpha
Helix 94
AK4
C
227 248Right-handed alpha
Helix 95
AK5
C
251 261Right-handed alpha
Helix 96
AK6
C
276 285Right-handed alpha
Helix 97
AK7
C
287 292Right-handed alpha
Helix 98
AK8
C
293 305Right-handed alpha
Helix 99
AK9
C
315 329Right-handed alpha
Helix 100
AL1
C
329 340Right-handed alpha
Helix 101
AL2
C
351 371Right-handed alpha
Helix 102
AL3
C
408 432Right-handed alpha
Helix 103
AL4
C
436 439Right-handed 310
Helix 104
AL5
C
440 474Right-handed alpha
Helix 105
AL6
C
481 485Right-handed 310
Helix 106
AL7
C
489 506Right-handed alpha
Helix 107
AL8
C
507 513Right-handed alpha
Helix 108
AL9
C
514 516Right-handed 310
Helix 109
AM1
C
519 529Right-handed alpha
Helix 110
AM2
C
529 556Right-handed alpha
Helix 111
AM3
C
557 564Right-handed alpha
Helix 112
AM4
C
595 605Right-handed alpha
Helix 113
AM5
C
606 608Right-handed 310
Helix 114
AM6
C
613 618Right-handed alpha
Helix 115
AM7
C
622 642Right-handed alpha
Helix 116
AM8
C
643 660Right-handed alpha
Helix 117
AM9
C
662 677Right-handed alpha
Helix 118
AN1
C
686 690Right-handed 310
Helix 119
AN2
C
730 759Right-handed alpha
Helix 120
AN3
C
763 789Right-handed alpha
Helix 121
AN4
D
9 14Right-handed 310
Helix 122
AN5
D
18 31Right-handed alpha
Helix 123
AN6
D
32 47Right-handed alpha
Helix 124
AN7
D
60 68Right-handed alpha
Helix 125
AN8
D
70 80Right-handed alpha
Helix 126
AN9
D
86 94Right-handed alpha
Helix 127
AO1
D
96 108Right-handed alpha
Helix 128
AO2
D
134 143Right-handed alpha
Helix 129
AO3
D
144 154Right-handed alpha
Helix 130
AO4
D
168 178Right-handed alpha
Helix 131
AO5
D
179 194Right-handed alpha
Helix 132
AO6
D
195 202Right-handed alpha
Helix 133
AO7
D
205 224Right-handed alpha
Helix 134
AO8
D
227 248Right-handed alpha
Helix 135
AO9
D
251 261Right-handed alpha
Helix 136
AP1
D
276 285Right-handed alpha
Helix 137
AP2
D
287 292Right-handed alpha
Helix 138
AP3
D
293 305Right-handed alpha
Helix 139
AP4
D
315 329Right-handed alpha
Helix 140
AP5
D
329 340Right-handed alpha
Helix 141
AP6
D
351 371Right-handed alpha
Helix 142
AP7
D
408 432Right-handed alpha
Helix 143
AP8
D
436 439Right-handed 310
Helix 144
AP9
D
440 474Right-handed alpha
Helix 145
AQ1
D
481 485Right-handed 310
Helix 146
AQ2
D
489 506Right-handed alpha
Helix 147
AQ3
D
507 513Right-handed alpha
Helix 148
AQ4
D
514 516Right-handed 310
Helix 149
AQ5
D
519 529Right-handed alpha
Helix 150
AQ6
D
529 556Right-handed alpha
Helix 151
AQ7
D
557 564Right-handed alpha
Helix 152
AQ8
D
595 605Right-handed alpha
Helix 153
AQ9
D
606 608Right-handed 310
Helix 154
AR1
D
613 618Right-handed alpha
Helix 155
AR2
D
622 642Right-handed alpha
Helix 156
AR3
D
643 660Right-handed alpha
Helix 157
AR4
D
662 677Right-handed alpha
Helix 158
AR5
D
686 690Right-handed 310
Helix 159
AR6
D
730 759Right-handed alpha
Helix 160
AR7
D
763 789Right-handed alpha
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