Analysis of interatomic Contacts of Structural Units in PDB entry:
9VSC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9VSC entry

There are 3 chains in PDB entry 9VSC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 61LYS 434
B
 ASP 61LYS 434
C
 ASP 61LYS 434
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 84 helices in PDB entry 9VSC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
64 69Right-handed alpha
Helix 2
AA2
A
78 81Right-handed 310
Helix 3
AA3
A
82 87Right-handed alpha
Helix 4
AA4
A
94 107Right-handed alpha
Helix 5
AA5
A
108 120Right-handed alpha
Helix 6
AA6
A
121 124Right-handed 310
Helix 7
AA7
A
127 135Right-handed 310
Helix 8
AA8
A
140 150Right-handed alpha
Helix 9
AA9
A
153 161Right-handed alpha
Helix 10
AB1
A
162 170Right-handed alpha
Helix 11
AB2
A
172 177Right-handed alpha
Helix 12
AB3
A
178 183Right-handed alpha
Helix 13
AB4
A
193 196Right-handed 310
Helix 14
AB5
A
197 217Right-handed alpha
Helix 15
AB6
A
225 250Right-handed alpha
Helix 16
AB7
A
250 255Right-handed alpha
Helix 17
AB8
A
284 295Right-handed alpha
Helix 18
AB9
A
298 309Right-handed alpha
Helix 19
AC1
A
311 315Right-handed 310
Helix 20
AC2
A
320 325Right-handed alpha
Helix 21
AC3
A
327 334Right-handed alpha
Helix 22
AC4
A
339 347Right-handed alpha
Helix 23
AC5
A
352 358Right-handed alpha
Helix 24
AC6
A
360 367Right-handed alpha
Helix 25
AC7
A
367 380Right-handed alpha
Helix 26
AC8
A
388 406Right-handed alpha
Helix 27
AC9
A
413 422Right-handed alpha
Helix 28
AD1
A
422 433Right-handed alpha
Helix 29
AD2
B
64 69Right-handed alpha
Helix 30
AD3
B
78 81Right-handed 310
Helix 31
AD4
B
82 87Right-handed alpha
Helix 32
AD5
B
94 107Right-handed alpha
Helix 33
AD6
B
108 120Right-handed alpha
Helix 34
AD7
B
121 124Right-handed 310
Helix 35
AD8
B
127 135Right-handed 310
Helix 36
AD9
B
140 150Right-handed alpha
Helix 37
AE1
B
153 161Right-handed alpha
Helix 38
AE2
B
162 170Right-handed alpha
Helix 39
AE3
B
172 177Right-handed alpha
Helix 40
AE4
B
178 183Right-handed alpha
Helix 41
AE5
B
193 196Right-handed 310
Helix 42
AE6
B
197 217Right-handed alpha
Helix 43
AE7
B
225 250Right-handed alpha
Helix 44
AE8
B
250 255Right-handed alpha
Helix 45
AE9
B
284 295Right-handed alpha
Helix 46
AF1
B
298 309Right-handed alpha
Helix 47
AF2
B
311 315Right-handed 310
Helix 48
AF3
B
320 325Right-handed alpha
Helix 49
AF4
B
327 334Right-handed alpha
Helix 50
AF5
B
339 347Right-handed alpha
Helix 51
AF6
B
352 358Right-handed alpha
Helix 52
AF7
B
360 367Right-handed alpha
Helix 53
AF8
B
367 380Right-handed alpha
Helix 54
AF9
B
388 406Right-handed alpha
Helix 55
AG1
B
413 422Right-handed alpha
Helix 56
AG2
B
422 433Right-handed alpha
Helix 57
AG3
C
64 69Right-handed alpha
Helix 58
AG4
C
78 81Right-handed 310
Helix 59
AG5
C
82 87Right-handed alpha
Helix 60
AG6
C
94 107Right-handed alpha
Helix 61
AG7
C
108 120Right-handed alpha
Helix 62
AG8
C
121 124Right-handed 310
Helix 63
AG9
C
127 135Right-handed 310
Helix 64
AH1
C
140 150Right-handed alpha
Helix 65
AH2
C
153 161Right-handed alpha
Helix 66
AH3
C
162 170Right-handed alpha
Helix 67
AH4
C
172 177Right-handed alpha
Helix 68
AH5
C
178 183Right-handed alpha
Helix 69
AH6
C
193 196Right-handed 310
Helix 70
AH7
C
197 217Right-handed alpha
Helix 71
AH8
C
225 250Right-handed alpha
Helix 72
AH9
C
250 255Right-handed alpha
Helix 73
AI1
C
284 295Right-handed alpha
Helix 74
AI2
C
298 309Right-handed alpha
Helix 75
AI3
C
311 315Right-handed 310
Helix 76
AI4
C
320 325Right-handed alpha
Helix 77
AI5
C
327 334Right-handed alpha
Helix 78
AI6
C
339 347Right-handed alpha
Helix 79
AI7
C
352 358Right-handed alpha
Helix 80
AI8
C
360 367Right-handed alpha
Helix 81
AI9
C
367 380Right-handed alpha
Helix 82
AJ1
C
388 406Right-handed alpha
Helix 83
AJ2
C
413 422Right-handed alpha
Helix 84
AJ3
C
422 433Right-handed alpha
Back to top of page
There are no sheets in PDB entry 9VSC
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il