Analysis of interatomic Contacts of Structural Units in PDB entry:
9VU0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9VU0 entry

There are 4 chains in PDB entry 9VU0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 118ASN 766
B
 ILE 118GLY 765
C
 ILE 118GLY 765
D
 ILE 118GLY 765
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are125 helices in PDB entry 9VU0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
118 124Right-handed alpha
Helix 2
AA2
A
146 150Right-handed 310
Helix 3
AA3
A
157 165Right-handed alpha
Helix 4
AA4
A
172 184Right-handed alpha
Helix 5
AA5
A
186 192Right-handed alpha
Helix 6
AA6
A
204 212Right-handed alpha
Helix 7
AA7
A
214 224Right-handed alpha
Helix 8
AA8
A
234 238Right-handed 310
Helix 9
AA9
A
251 259Right-handed alpha
Helix 10
AB1
A
261 270Right-handed alpha
Helix 11
AB2
A
287 295Right-handed alpha
Helix 12
AB3
A
299 321Right-handed alpha
Helix 13
AB4
A
325 329Right-handed 310
Helix 14
AB5
A
336 345Right-handed alpha
Helix 15
AB6
A
346 355Right-handed alpha
Helix 16
AB7
A
363 367Right-handed 310
Helix 17
AB8
A
395 402Right-handed alpha
Helix 18
AB9
A
412 416Right-handed 310
Helix 19
AC1
A
418 430Right-handed alpha
Helix 20
AC2
A
431 455Right-handed alpha
Helix 21
AC3
A
468 500Right-handed alpha
Helix 22
AC4
A
502 509Right-handed alpha
Helix 23
AC5
A
510 531Right-handed alpha
Helix 24
AC6
A
532 533Right-handed 310
Helix 25
AC7
A
534 535Right-handed 310
Helix 26
AC8
A
536 552Right-handed alpha
Helix 27
AC9
A
553 558Right-handed 310
Helix 28
AD1
A
559 599Right-handed alpha
Helix 29
AD2
A
630 641Right-handed alpha
Helix 30
AD3
A
656 672Right-handed alpha
Helix 31
AD4
A
674 690Right-handed alpha
Helix 32
AD5
A
690 714Right-handed alpha
Helix 33
AD6
A
715 717Right-handed 310
Helix 34
AD7
B
119 124Right-handed alpha
Helix 35
AD8
B
146 150Right-handed 310
Helix 36
AD9
B
157 165Right-handed alpha
Helix 37
AE1
B
172 181Right-handed alpha
Helix 38
AE2
B
188 192Right-handed alpha
Helix 39
AE3
B
204 212Right-handed alpha
Helix 40
AE4
B
214 224Right-handed alpha
Helix 41
AE5
B
234 238Right-handed 310
Helix 42
AE6
B
251 259Right-handed alpha
Helix 43
AE7
B
261 270Right-handed alpha
Helix 44
AE8
B
287 295Right-handed alpha
Helix 45
AE9
B
299 321Right-handed alpha
Helix 46
AF1
B
325 329Right-handed 310
Helix 47
AF2
B
336 344Right-handed alpha
Helix 48
AF3
B
346 355Right-handed alpha
Helix 49
AF4
B
363 367Right-handed 310
Helix 50
AF5
B
395 402Right-handed alpha
Helix 51
AF6
B
412 416Right-handed 310
Helix 52
AF7
B
418 430Right-handed alpha
Helix 53
AF8
B
431 455Right-handed alpha
Helix 54
AF9
B
469 500Right-handed alpha
Helix 55
AG1
B
502 509Right-handed alpha
Helix 56
AG2
B
511 532Right-handed alpha
Helix 57
AG3
B
536 552Right-handed alpha
Helix 58
AG4
B
553 558Right-handed 310
Helix 59
AG5
B
559 599Right-handed alpha
Helix 60
AG6
B
630 641Right-handed alpha
Helix 61
AG7
B
656 672Right-handed alpha
Helix 62
AG8
B
674 690Right-handed alpha
Helix 63
AG9
B
690 713Right-handed alpha
Helix 64
AH1
C
119 124Right-handed alpha
Helix 65
AH2
C
146 150Right-handed 310
Helix 66
AH3
C
157 165Right-handed alpha
Helix 67
AH4
C
172 183Right-handed alpha
Helix 68
AH5
C
187 192Right-handed alpha
Helix 69
AH6
C
204 212Right-handed alpha
Helix 70
AH7
C
214 224Right-handed alpha
Helix 71
AH8
C
234 238Right-handed 310
Helix 72
AH9
C
251 259Right-handed alpha
Helix 73
AI1
C
261 270Right-handed alpha
Helix 74
AI2
C
287 295Right-handed alpha
Helix 75
AI3
C
299 321Right-handed alpha
Helix 76
AI4
C
325 329Right-handed 310
Helix 77
AI5
C
336 344Right-handed alpha
Helix 78
AI6
C
346 355Right-handed alpha
Helix 79
AI7
C
363 367Right-handed 310
Helix 80
AI8
C
395 402Right-handed alpha
Helix 81
AI9
C
412 416Right-handed 310
Helix 82
AJ1
C
418 430Right-handed alpha
Helix 83
AJ2
C
430 455Right-handed alpha
Helix 84
AJ3
C
468 500Right-handed alpha
Helix 85
AJ4
C
502 509Right-handed alpha
Helix 86
AJ5
C
510 532Right-handed alpha
Helix 87
AJ6
C
536 552Right-handed alpha
Helix 88
AJ7
C
553 558Right-handed 310
Helix 89
AJ8
C
559 599Right-handed alpha
Helix 90
AJ9
C
630 641Right-handed alpha
Helix 91
AK1
C
656 672Right-handed alpha
Helix 92
AK2
C
674 690Right-handed alpha
Helix 93
AK3
C
690 713Right-handed alpha
Helix 94
AK4
D
119 124Right-handed alpha
Helix 95
AK5
D
146 150Right-handed 310
Helix 96
AK6
D
157 165Right-handed alpha
Helix 97
AK7
D
172 178Right-handed alpha
Helix 98
AK8
D
188 192Right-handed alpha
Helix 99
AK9
D
204 212Right-handed alpha
Helix 100
AL1
D
214 224Right-handed alpha
Helix 101
AL2
D
234 238Right-handed 310
Helix 102
AL3
D
251 259Right-handed alpha
Helix 103
AL4
D
261 270Right-handed alpha
Helix 104
AL5
D
287 295Right-handed alpha
Helix 105
AL6
D
299 321Right-handed alpha
Helix 106
AL7
D
325 329Right-handed 310
Helix 107
AL8
D
336 344Right-handed alpha
Helix 108
AL9
D
346 355Right-handed alpha
Helix 109
AM1
D
363 367Right-handed 310
Helix 110
AM2
D
395 402Right-handed alpha
Helix 111
AM3
D
412 416Right-handed 310
Helix 112
AM4
D
418 430Right-handed alpha
Helix 113
AM5
D
431 455Right-handed alpha
Helix 114
AM6
D
468 500Right-handed alpha
Helix 115
AM7
D
502 509Right-handed alpha
Helix 116
AM8
D
510 531Right-handed alpha
Helix 117
AM9
D
532 533Right-handed 310
Helix 118
AN1
D
534 535Right-handed 310
Helix 119
AN2
D
536 552Right-handed alpha
Helix 120
AN3
D
553 558Right-handed 310
Helix 121
AN4
D
559 599Right-handed alpha
Helix 122
AN5
D
630 641Right-handed alpha
Helix 123
AN6
D
656 672Right-handed alpha
Helix 124
AN7
D
674 690Right-handed alpha
Helix 125
AN8
D
690 712Right-handed alpha
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There are 4 sheets in PDB entry 9VU0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
369 375first strand
Strand 2
A
378 384anti-parallel
Strand 3
A
737 748anti-parallel
Strand 4
A
725 731anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
369 375first strand
Strand 2
B
378 384anti-parallel
Strand 3
B
737 748anti-parallel
Strand 4
B
725 731anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
369 375first strand
Strand 2
C
378 384anti-parallel
Strand 3
C
737 748anti-parallel
Strand 4
C
725 731anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
369 375first strand
Strand 2
D
378 384anti-parallel
Strand 3
D
737 748anti-parallel
Strand 4
D
725 731anti-parallel
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