Analysis of interatomic Contacts of Structural Units in PDB entry:
9W0X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9W0X entry

There are 2 chains in PDB entry 9W0X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 9PHE 644
D
 GLY 9PHE 644
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 9W0X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
21 33Right-handed alpha
Helix 2
AA2
A
66 112Right-handed alpha
Helix 3
AA3
A
129 139Right-handed alpha
Helix 4
AA4
A
165 206Right-handed alpha
Helix 5
AA5
A
214 222Right-handed alpha
Helix 6
AA6
A
229 247Right-handed alpha
Helix 7
AA7
A
251 261Right-handed alpha
Helix 8
AA8
A
268 291Right-handed alpha
Helix 9
AA9
A
296 329Right-handed alpha
Helix 10
AB1
A
332 338Right-handed alpha
Helix 11
AB2
A
346 370Right-handed alpha
Helix 12
AB3
A
379 393Right-handed alpha
Helix 13
AB4
A
400 416Right-handed alpha
Helix 14
AB5
A
423 435Right-handed alpha
Helix 15
AB6
A
436 441Right-handed alpha
Helix 16
AB7
A
441 452Right-handed alpha
Helix 17
AB8
A
456 460Right-handed 310
Helix 18
AB9
A
465 491Right-handed alpha
Helix 19
AC1
A
493 519Right-handed alpha
Helix 20
AC2
A
524 547Right-handed alpha
Helix 21
AC3
A
570 584Right-handed alpha
Helix 22
AC4
A
586 592Right-handed alpha
Helix 23
AC5
A
600 635Right-handed alpha
Helix 24
AC6
D
21 33Right-handed alpha
Helix 25
AC7
D
66 112Right-handed alpha
Helix 26
AC8
D
129 139Right-handed alpha
Helix 27
AC9
D
165 206Right-handed alpha
Helix 28
AD1
D
214 222Right-handed alpha
Helix 29
AD2
D
229 247Right-handed alpha
Helix 30
AD3
D
251 261Right-handed alpha
Helix 31
AD4
D
268 291Right-handed alpha
Helix 32
AD5
D
296 329Right-handed alpha
Helix 33
AD6
D
332 338Right-handed alpha
Helix 34
AD7
D
346 370Right-handed alpha
Helix 35
AD8
D
379 393Right-handed alpha
Helix 36
AD9
D
400 416Right-handed alpha
Helix 37
AE1
D
423 435Right-handed alpha
Helix 38
AE2
D
436 441Right-handed alpha
Helix 39
AE3
D
441 452Right-handed alpha
Helix 40
AE4
D
456 460Right-handed 310
Helix 41
AE5
D
465 491Right-handed alpha
Helix 42
AE6
D
493 519Right-handed alpha
Helix 43
AE7
D
524 547Right-handed alpha
Helix 44
AE8
D
570 584Right-handed alpha
Helix 45
AE9
D
586 592Right-handed alpha
Helix 46
AF1
D
600 635Right-handed alpha
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There are 4 sheets in PDB entry 9W0X. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
147 148first strand
Strand 2
A
163 164anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
551 553first strand
Strand 2
A
558 560anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
147 148first strand
Strand 2
D
163 164anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
551 553first strand
Strand 2
D
558 560anti-parallel
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