Analysis of interatomic Contacts of Structural Units in PDB entry:
9W1E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9W1E entry

There are 7 chains in PDB entry 9W1E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1THR 610
B
 MET 1THR 608
C
 SER 220PRO 607
D
 SER 220PRO 607
E
 SER 233PRO 607
F
 LEU 235PRO 607
X
 A 1 A 6
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are141 helices in PDB entry 9W1E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 19Right-handed alpha
Helix 2
AA2
A
20 21Right-handed 310
Helix 3
AA3
A
22 26Right-handed 310
Helix 4
AA4
A
40 44Right-handed 310
Helix 5
AA5
A
46 54Right-handed alpha
Helix 6
AA6
A
72 91Right-handed alpha
Helix 7
AA7
A
93 95Right-handed 310
Helix 8
AA8
A
105 119Right-handed alpha
Helix 9
AA9
A
143 152Right-handed alpha
Helix 10
AB1
A
174 178Right-handed 310
Helix 11
AB2
A
196 211Right-handed alpha
Helix 12
AB3
A
224 230Right-handed 310
Helix 13
AB4
A
231 239Right-handed alpha
Helix 14
AB5
A
247 254Right-handed alpha
Helix 15
AB6
A
270 279Right-handed alpha
Helix 16
AB7
A
282 286Right-handed 310
Helix 17
AB8
A
305 313Right-handed alpha
Helix 18
AB9
A
320 323Right-handed 310
Helix 19
AC1
A
324 342Right-handed alpha
Helix 20
AC2
A
352 357Right-handed 310
Helix 21
AC3
A
362 381Right-handed alpha
Helix 22
AC4
A
396 400Right-handed 310
Helix 23
AC5
A
402 420Right-handed alpha
Helix 24
AC6
A
432 435Right-handed 310
Helix 25
AC7
A
436 446Right-handed alpha
Helix 26
AC8
A
448 455Right-handed alpha
Helix 27
AC9
A
467 477Right-handed alpha
Helix 28
AD1
A
488 491Right-handed 310
Helix 29
AD2
A
492 503Right-handed alpha
Helix 30
AD3
A
509 517Right-handed alpha
Helix 31
AD4
A
533 540Right-handed alpha
Helix 32
AD5
A
556 568Right-handed alpha
Helix 33
AD6
A
572 586Right-handed alpha
Helix 34
AD7
A
590 602Right-handed alpha
Helix 35
AD8
B
13 19Right-handed alpha
Helix 36
AD9
B
39 54Right-handed alpha
Helix 37
AE1
B
72 90Right-handed alpha
Helix 38
AE2
B
105 119Right-handed alpha
Helix 39
AE3
B
143 151Right-handed alpha
Helix 40
AE4
B
169 173Right-handed 310
Helix 41
AE5
B
196 213Right-handed alpha
Helix 42
AE6
B
224 230Right-handed 310
Helix 43
AE7
B
231 240Right-handed alpha
Helix 44
AE8
B
247 254Right-handed alpha
Helix 45
AE9
B
270 279Right-handed alpha
Helix 46
AF1
B
282 286Right-handed 310
Helix 47
AF2
B
305 313Right-handed alpha
Helix 48
AF3
B
320 323Right-handed 310
Helix 49
AF4
B
324 342Right-handed alpha
Helix 50
AF5
B
352 357Right-handed 310
Helix 51
AF6
B
362 381Right-handed alpha
Helix 52
AF7
B
404 420Right-handed alpha
Helix 53
AF8
B
441 446Right-handed alpha
Helix 54
AF9
B
448 455Right-handed alpha
Helix 55
AG1
B
467 477Right-handed alpha
Helix 56
AG2
B
492 503Right-handed alpha
Helix 57
AG3
B
509 517Right-handed alpha
Helix 58
AG4
B
532 539Right-handed alpha
Helix 59
AG5
B
549 554Right-handed alpha
Helix 60
AG6
B
556 568Right-handed alpha
Helix 61
AG7
B
572 587Right-handed alpha
Helix 62
AG8
B
590 602Right-handed alpha
Helix 63
AG9
C
224 230Right-handed 310
Helix 64
AH1
C
231 239Right-handed alpha
Helix 65
AH2
C
247 254Right-handed alpha
Helix 66
AH3
C
270 279Right-handed alpha
Helix 67
AH4
C
282 286Right-handed 310
Helix 68
AH5
C
305 313Right-handed alpha
Helix 69
AH6
C
320 323Right-handed 310
Helix 70
AH7
C
324 342Right-handed alpha
Helix 71
AH8
C
362 381Right-handed alpha
Helix 72
AH9
C
404 420Right-handed alpha
Helix 73
AI1
C
433 436Right-handed 310
Helix 74
AI2
C
438 446Right-handed alpha
Helix 75
AI3
C
448 455Right-handed alpha
Helix 76
AI4
C
467 477Right-handed alpha
Helix 77
AI5
C
488 491Right-handed 310
Helix 78
AI6
C
492 503Right-handed alpha
Helix 79
AI7
C
509 517Right-handed alpha
Helix 80
AI8
C
532 539Right-handed alpha
Helix 81
AI9
C
556 568Right-handed alpha
Helix 82
AJ1
C
572 587Right-handed alpha
Helix 83
AJ2
C
590 602Right-handed alpha
Helix 84
AJ3
D
224 228Right-handed 310
Helix 85
AJ4
D
231 239Right-handed alpha
Helix 86
AJ5
D
247 254Right-handed alpha
Helix 87
AJ6
D
270 279Right-handed alpha
Helix 88
AJ7
D
282 286Right-handed 310
Helix 89
AJ8
D
305 314Right-handed alpha
Helix 90
AJ9
D
320 323Right-handed 310
Helix 91
AK1
D
324 342Right-handed alpha
Helix 92
AK2
D
352 357Right-handed 310
Helix 93
AK3
D
362 381Right-handed alpha
Helix 94
AK4
D
402 420Right-handed alpha
Helix 95
AK5
D
432 435Right-handed 310
Helix 96
AK6
D
437 445Right-handed alpha
Helix 97
AK7
D
448 454Right-handed alpha
Helix 98
AK8
D
467 478Right-handed alpha
Helix 99
AK9
D
492 503Right-handed alpha
Helix 100
AL1
D
509 517Right-handed alpha
Helix 101
AL2
D
532 540Right-handed alpha
Helix 102
AL3
D
556 568Right-handed alpha
Helix 103
AL4
D
572 587Right-handed alpha
Helix 104
AL5
D
590 602Right-handed alpha
Helix 105
AL6
E
234 238Right-handed alpha
Helix 106
AL7
E
247 254Right-handed alpha
Helix 107
AL8
E
270 279Right-handed alpha
Helix 108
AL9
E
282 286Right-handed 310
Helix 109
AM1
E
305 313Right-handed alpha
Helix 110
AM2
E
324 342Right-handed alpha
Helix 111
AM3
E
362 380Right-handed alpha
Helix 112
AM4
E
403 420Right-handed alpha
Helix 113
AM5
E
432 435Right-handed 310
Helix 114
AM6
E
438 446Right-handed alpha
Helix 115
AM7
E
448 455Right-handed alpha
Helix 116
AM8
E
467 477Right-handed alpha
Helix 117
AM9
E
492 503Right-handed alpha
Helix 118
AN1
E
509 517Right-handed alpha
Helix 119
AN2
E
532 540Right-handed alpha
Helix 120
AN3
E
556 568Right-handed alpha
Helix 121
AN4
E
572 587Right-handed alpha
Helix 122
AN5
E
590 602Right-handed alpha
Helix 123
AN6
F
236 240Right-handed 310
Helix 124
AN7
F
247 254Right-handed alpha
Helix 125
AN8
F
270 279Right-handed alpha
Helix 126
AN9
F
282 286Right-handed 310
Helix 127
AO1
F
306 313Right-handed alpha
Helix 128
AO2
F
320 323Right-handed 310
Helix 129
AO3
F
324 342Right-handed alpha
Helix 130
AO4
F
352 357Right-handed 310
Helix 131
AO5
F
362 381Right-handed alpha
Helix 132
AO6
F
404 420Right-handed alpha
Helix 133
AO7
F
437 446Right-handed alpha
Helix 134
AO8
F
448 455Right-handed alpha
Helix 135
AO9
F
467 477Right-handed alpha
Helix 136
AP1
F
492 503Right-handed alpha
Helix 137
AP2
F
509 517Right-handed alpha
Helix 138
AP3
F
532 540Right-handed alpha
Helix 139
AP4
F
556 568Right-handed alpha
Helix 140
AP5
F
572 587Right-handed alpha
Helix 141
AP6
F
590 602Right-handed alpha
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There are 9 sheets in PDB entry 9W1E. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
156 162first strand
Strand 2
A
123 129anti-parallel
Strand 3
A
97 100parallel
Strand 4
A
3 5parallel
Strand 5
A
29 34parallel
Strand 6
A
58 64parallel
Strand 7
A
188 192parallel
Strand 8
A
181 184anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
256 262first strand
Strand 2
A
344 351parallel
Strand 3
A
388 394parallel
Strand 4
A
426 431parallel
Strand 5
A
457 460parallel
Strand 6
A
482 484parallel
Strand 7
A
505 508parallel
Strand 8
A
543 545parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
124 125first strand
Strand 2
B
97 100parallel
Strand 3
B
3 6parallel
Strand 4
B
29 34parallel
Strand 5
B
58 64parallel
Strand 6
B
189 192parallel
Strand 7
B
181 183anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
128 129first strand
Strand 2
B
156 157anti-parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
256 262first strand
Strand 2
B
344 351parallel
Strand 3
B
388 395parallel
Strand 4
B
426 431parallel
Strand 5
B
457 460parallel
Strand 6
B
482 484parallel
Strand 7
B
505 508parallel
Strand 8
B
543 545parallel
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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
256 262first strand
Strand 2
C
344 351parallel
Strand 3
C
388 395parallel
Strand 4
C
426 431parallel
Strand 5
C
457 461parallel
Strand 6
C
482 484parallel
Strand 7
C
505 508parallel
Strand 8
C
543 545parallel
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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
256 262first strand
Strand 2
D
344 351parallel
Strand 3
D
388 394parallel
Strand 4
D
426 431parallel
Strand 5
D
457 462parallel
Strand 6
D
482 485parallel
Strand 7
D
505 508parallel
Strand 8
D
543 545parallel
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There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
256 262first strand
Strand 2
E
344 351parallel
Strand 3
E
388 394parallel
Strand 4
E
426 431parallel
Strand 5
E
457 461parallel
Strand 6
E
482 484parallel
Strand 7
E
505 508parallel
Strand 8
E
543 545parallel
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There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
256 262first strand
Strand 2
F
344 351parallel
Strand 3
F
388 394parallel
Strand 4
F
426 430parallel
Strand 5
F
457 460parallel
Strand 6
F
482 484parallel
Strand 7
F
505 508parallel
Strand 8
F
543 545parallel
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