Analysis of interatomic Contacts of Structural Units in PDB entry:
9W1Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9W1Q entry

There are 2 chains in PDB entry 9W1Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 5GLU 426
B
 GLY 5GLU 426
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 9W1Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 29Right-handed alpha
Helix 2
AA2
A
29 42Right-handed alpha
Helix 3
AA3
A
45 74Right-handed alpha
Helix 4
AA4
A
75 97Right-handed alpha
Helix 5
AA5
A
99 129Right-handed alpha
Helix 6
AA6
A
133 143Right-handed alpha
Helix 7
AA7
A
143 163Right-handed alpha
Helix 8
AA8
A
164 187Right-handed alpha
Helix 9
AA9
A
216 222Right-handed alpha
Helix 10
AB1
A
223 253Right-handed alpha
Helix 11
AB2
A
258 291Right-handed alpha
Helix 12
AB3
A
301 321Right-handed alpha
Helix 13
AB4
A
327 356Right-handed alpha
Helix 14
AB5
A
361 391Right-handed alpha
Helix 15
AB6
A
392 426Right-handed alpha
Helix 16
AB7
B
6 29Right-handed alpha
Helix 17
AB8
B
29 42Right-handed alpha
Helix 18
AB9
B
45 74Right-handed alpha
Helix 19
AC1
B
75 97Right-handed alpha
Helix 20
AC2
B
99 129Right-handed alpha
Helix 21
AC3
B
133 143Right-handed alpha
Helix 22
AC4
B
143 163Right-handed alpha
Helix 23
AC5
B
164 187Right-handed alpha
Helix 24
AC6
B
216 222Right-handed alpha
Helix 25
AC7
B
223 253Right-handed alpha
Helix 26
AC8
B
258 291Right-handed alpha
Helix 27
AC9
B
301 321Right-handed alpha
Helix 28
AD1
B
327 356Right-handed alpha
Helix 29
AD2
B
361 391Right-handed alpha
Helix 30
AD3
B
392 426Right-handed alpha
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There are no sheets in PDB entry 9W1Q
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il