Analysis of interatomic Contacts of Structural Units in PDB entry:
9W2Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9W2Z entry

There are 14 chains in PDB entry 9W2Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 2LYS 514
B
 ALA 2LEU 227
C
 GLN 4TRP 259
D
 TYR 11LYS 146
E
 THR 7LYS 108
F
 GLY 3PRO 93
G
 GLY 12GLU 83
H
 GLN 5ILE 85
I
 ALA 3ALA 72
J
 PHE 1PHE 55
K
 ALA 6ARG 54
L
 TYR 3LYS 46
M
 ILE 1TYR 40
N
 LEU 2PHE 82
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 72 helices in PDB entry 9W2Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 7Right-handed alpha
Helix 2
AA2
A
11 41Right-handed alpha
Helix 3
AA3
A
50 68Right-handed alpha
Helix 4
AA4
A
69 75Right-handed alpha
Helix 5
AA5
A
76 83Right-handed alpha
Helix 6
AA6
A
84 87Right-handed 310
Helix 7
AA7
A
94 104Right-handed alpha
Helix 8
AA8
A
104 116Right-handed alpha
Helix 9
AA9
A
141 171Right-handed alpha
Helix 10
AB1
A
177 181Right-handed 310
Helix 11
AB2
A
182 215Right-handed alpha
Helix 12
AB3
A
227 262Right-handed alpha
Helix 13
AB4
A
269 284Right-handed alpha
Helix 14
AB5
A
287 292Right-handed 310
Helix 15
AB6
A
298 311Right-handed alpha
Helix 16
AB7
A
312 327Right-handed alpha
Helix 17
AB8
A
335 358Right-handed alpha
Helix 18
AB9
A
362 366Right-handed 310
Helix 19
AC1
A
370 382Right-handed alpha
Helix 20
AC2
A
383 401Right-handed alpha
Helix 21
AC3
A
406 426Right-handed alpha
Helix 22
AC4
A
427 434Right-handed alpha
Helix 23
AC5
A
444 446Right-handed 310
Helix 24
AC6
A
447 478Right-handed alpha
Helix 25
AC7
A
491 495Right-handed 310
Helix 26
AC8
B
14 46Right-handed alpha
Helix 27
AC9
B
59 89Right-handed alpha
Helix 28
AD1
B
124 128Right-handed 310
Helix 29
AD2
B
166 169Right-handed 310
Helix 30
AD3
B
215 227Right-handed alpha
Helix 31
AD4
C
15 38Right-handed alpha
Helix 32
AD5
C
40 67Right-handed alpha
Helix 33
AD6
C
72 107Right-handed alpha
Helix 34
AD7
C
128 153Right-handed alpha
Helix 35
AD8
C
156 184Right-handed alpha
Helix 36
AD9
C
191 224Right-handed alpha
Helix 37
AE1
C
232 258Right-handed alpha
Helix 38
AE2
D
28 32Right-handed 310
Helix 39
AE3
D
37 39Right-handed 310
Helix 40
AE4
D
40 47Right-handed alpha
Helix 41
AE5
D
52 64Right-handed alpha
Helix 42
AE6
D
67 72Right-handed alpha
Helix 43
AE7
D
76 103Right-handed alpha
Helix 44
AE8
D
108 111Right-handed 310
Helix 45
AE9
D
112 126Right-handed alpha
Helix 46
AF1
D
134 138Right-handed 310
Helix 47
AF2
E
8 21Right-handed alpha
Helix 48
AF3
E
26 37Right-handed alpha
Helix 49
AF4
E
44 58Right-handed alpha
Helix 50
AF5
E
60 74Right-handed alpha
Helix 51
AF6
E
80 89Right-handed alpha
Helix 52
AF7
E
89 97Right-handed alpha
Helix 53
AF8
E
100 105Right-handed alpha
Helix 54
AF9
F
15 26Right-handed alpha
Helix 55
AG1
G
13 23Right-handed alpha
Helix 56
AG2
G
23 39Right-handed alpha
Helix 57
AG3
H
25 47Right-handed alpha
Helix 58
AG4
H
50 52Right-handed 310
Helix 59
AG5
H
53 64Right-handed alpha
Helix 60
AG6
H
65 79Right-handed alpha
Helix 61
AG7
I
11 53Right-handed alpha
Helix 62
AG8
I
55 67Right-handed alpha
Helix 63
AG9
J
4 14Right-handed alpha
Helix 64
AH1
J
19 23Right-handed 310
Helix 65
AH2
J
28 55Right-handed alpha
Helix 66
AH3
K
7 13Right-handed alpha
Helix 67
AH4
K
13 35Right-handed alpha
Helix 68
AH5
L
17 46Right-handed alpha
Helix 69
AH6
M
11 36Right-handed alpha
Helix 70
AH7
M
37 39Right-handed 310
Helix 71
AH8
N
3 10Right-handed alpha
Helix 72
AH9
N
14 40Right-handed alpha
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There are 5 sheets in PDB entry 9W2Z. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
116 120first strand
Strand 2
B
106 110anti-parallel
Strand 3
B
96 101anti-parallel
Strand 4
B
149 155parallel
Strand 5
B
180 185anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
142 144first strand
Strand 2
B
208 213parallel
Strand 3
B
191 195anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
161 165first strand
Strand 2
B
170 174anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
47 50first strand
Strand 2
F
88 92parallel
Strand 3
F
80 81anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
55 60first strand
Strand 2
F
70 75anti-parallel
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