Analysis of interatomic Contacts of Structural Units in PDB entry:
9W4G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9W4G entry

There are 4 chains in PDB entry 9W4G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 11ASN 267
B
 LYS 10HIS 280
C
 LEU 5ALA 148
D
 LEU 5ALA 148
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 9W4G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 25Right-handed alpha
Helix 2
AA2
A
34 43Right-handed alpha
Helix 3
AA3
A
49 60Right-handed alpha
Helix 4
AA4
A
61 71Right-handed alpha
Helix 5
AA5
A
72 86Right-handed alpha
Helix 6
AA6
A
91 110Right-handed alpha
Helix 7
AA7
A
111 121Right-handed alpha
Helix 8
AA8
A
123 130Right-handed alpha
Helix 9
AA9
A
131 133Right-handed 310
Helix 10
AB1
A
136 154Right-handed alpha
Helix 11
AB2
A
154 172Right-handed alpha
Helix 12
AB3
A
178 187Right-handed alpha
Helix 13
AB4
A
190 207Right-handed alpha
Helix 14
AB5
A
210 223Right-handed alpha
Helix 15
AB6
A
225 234Right-handed alpha
Helix 16
AB7
A
238 267Right-handed alpha
Helix 17
AB8
B
11 26Right-handed alpha
Helix 18
AB9
B
34 42Right-handed alpha
Helix 19
AC1
B
49 60Right-handed alpha
Helix 20
AC2
B
61 71Right-handed alpha
Helix 21
AC3
B
72 86Right-handed alpha
Helix 22
AC4
B
91 110Right-handed alpha
Helix 23
AC5
B
111 121Right-handed alpha
Helix 24
AC6
B
123 130Right-handed alpha
Helix 25
AC7
B
131 133Right-handed 310
Helix 26
AC8
B
136 154Right-handed alpha
Helix 27
AC9
B
154 172Right-handed alpha
Helix 28
AD1
B
178 187Right-handed alpha
Helix 29
AD2
B
190 207Right-handed alpha
Helix 30
AD3
B
210 223Right-handed alpha
Helix 31
AD4
B
225 234Right-handed alpha
Helix 32
AD5
B
238 269Right-handed alpha
Helix 33
AD6
B
270 280Right-handed alpha
Helix 34
AD7
C
6 21Right-handed alpha
Helix 35
AD8
C
29 40Right-handed alpha
Helix 36
AD9
C
45 55Right-handed alpha
Helix 37
AE1
C
66 75Right-handed alpha
Helix 38
AE2
C
76 80Right-handed 310
Helix 39
AE3
C
82 94Right-handed alpha
Helix 40
AE4
C
102 113Right-handed alpha
Helix 41
AE5
C
118 130Right-handed alpha
Helix 42
AE6
C
139 147Right-handed alpha
Helix 43
AE7
D
6 19Right-handed alpha
Helix 44
AE8
D
29 40Right-handed alpha
Helix 45
AE9
D
45 57Right-handed alpha
Helix 46
AF1
D
66 79Right-handed alpha
Helix 47
AF2
D
81 94Right-handed alpha
Helix 48
AF3
D
102 113Right-handed alpha
Helix 49
AF4
D
118 130Right-handed alpha
Helix 50
AF5
D
139 147Right-handed alpha
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There are 4 sheets in PDB entry 9W4G. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
27 28first strand
Strand 2
C
64 65anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
100 101first strand
Strand 2
C
137 138anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
27 28first strand
Strand 2
D
64 65anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
100 101first strand
Strand 2
D
137 138anti-parallel
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