Analysis of interatomic Contacts of Structural Units in PDB entry:
9W50


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9W50 entry

There are 2 chains in PDB entry 9W50 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 33LEU 870
B
 ARG 33LEU 870
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 66 helices in PDB entry 9W50. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
33 54Right-handed alpha
Helix 2
AA2
A
60 71Right-handed alpha
Helix 3
AA3
A
72 102Right-handed alpha
Helix 4
AA4
A
106 125Right-handed alpha
Helix 5
AA5
A
130 139Right-handed alpha
Helix 6
AA6
A
145 174Right-handed alpha
Helix 7
AA7
A
175 184Right-handed alpha
Helix 8
AA8
A
186 211Right-handed alpha
Helix 9
AA9
A
236 262Right-handed alpha
Helix 10
AB1
A
267 285Right-handed alpha
Helix 11
AB2
A
292 302Right-handed alpha
Helix 12
AB3
A
302 307Right-handed alpha
Helix 13
AB4
A
307 323Right-handed alpha
Helix 14
AB5
A
323 345Right-handed alpha
Helix 15
AB6
A
355 377Right-handed alpha
Helix 16
AB7
A
380 391Right-handed alpha
Helix 17
AB8
A
392 419Right-handed alpha
Helix 18
AB9
A
421 444Right-handed alpha
Helix 19
AC1
A
445 462Right-handed alpha
Helix 20
AC2
A
478 500Right-handed alpha
Helix 21
AC3
A
506 511Right-handed 310
Helix 22
AC4
A
518 542Right-handed alpha
Helix 23
AC5
A
553 566Right-handed alpha
Helix 24
AC6
A
570 576Right-handed 310
Helix 25
AC7
A
610 628Right-handed alpha
Helix 26
AC8
A
638 640Right-handed 310
Helix 27
AC9
A
641 649Right-handed alpha
Helix 28
AD1
A
672 689Right-handed alpha
Helix 29
AD2
A
701 715Right-handed alpha
Helix 30
AD3
A
729 736Right-handed alpha
Helix 31
AD4
A
776 793Right-handed alpha
Helix 32
AD5
A
835 842Right-handed alpha
Helix 33
AD6
A
861 870Right-handed alpha
Helix 34
AD7
B
34 54Right-handed alpha
Helix 35
AD8
B
60 71Right-handed alpha
Helix 36
AD9
B
72 102Right-handed alpha
Helix 37
AE1
B
106 125Right-handed alpha
Helix 38
AE2
B
130 139Right-handed alpha
Helix 39
AE3
B
145 174Right-handed alpha
Helix 40
AE4
B
175 184Right-handed alpha
Helix 41
AE5
B
186 211Right-handed alpha
Helix 42
AE6
B
236 262Right-handed alpha
Helix 43
AE7
B
267 285Right-handed alpha
Helix 44
AE8
B
292 302Right-handed alpha
Helix 45
AE9
B
302 307Right-handed alpha
Helix 46
AF1
B
307 323Right-handed alpha
Helix 47
AF2
B
323 345Right-handed alpha
Helix 48
AF3
B
355 377Right-handed alpha
Helix 49
AF4
B
380 391Right-handed alpha
Helix 50
AF5
B
392 419Right-handed alpha
Helix 51
AF6
B
421 444Right-handed alpha
Helix 52
AF7
B
445 462Right-handed alpha
Helix 53
AF8
B
478 500Right-handed alpha
Helix 54
AF9
B
506 511Right-handed 310
Helix 55
AG1
B
518 542Right-handed alpha
Helix 56
AG2
B
553 566Right-handed alpha
Helix 57
AG3
B
570 576Right-handed 310
Helix 58
AG4
B
610 628Right-handed alpha
Helix 59
AG5
B
638 640Right-handed 310
Helix 60
AG6
B
641 649Right-handed alpha
Helix 61
AG7
B
672 689Right-handed alpha
Helix 62
AG8
B
701 715Right-handed alpha
Helix 63
AG9
B
729 736Right-handed alpha
Helix 64
AH1
B
776 793Right-handed alpha
Helix 65
AH2
B
835 842Right-handed alpha
Helix 66
AH3
B
861 870Right-handed alpha
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There are 4 sheets in PDB entry 9W50. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
223 226first strand
Strand 2
A
231 234anti-parallel
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There are 11 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
581 584first strand
Strand 2
A
591 597anti-parallel
Strand 3
A
600 603anti-parallel
Strand 4
A
632 637parallel
Strand 5
A
846 854anti-parallel
Strand 6
A
651 662anti-parallel
Strand 7
A
796 801anti-parallel
Strand 8
A
761 768parallel
Strand 9
A
746 754anti-parallel
Strand 10
A
738 743anti-parallel
Strand 11
A
690 695anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
223 226first strand
Strand 2
B
231 234anti-parallel
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There are 11 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
581 584first strand
Strand 2
B
591 597anti-parallel
Strand 3
B
600 603anti-parallel
Strand 4
B
632 637parallel
Strand 5
B
846 854anti-parallel
Strand 6
B
651 662anti-parallel
Strand 7
B
796 801anti-parallel
Strand 8
B
761 768parallel
Strand 9
B
746 754anti-parallel
Strand 10
B
738 743anti-parallel
Strand 11
B
690 695anti-parallel
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