Analysis of interatomic Contacts of Structural Units in PDB entry:
9W51


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9W51 entry

There are 2 chains in PDB entry 9W51 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 33LEU 870
B
 ARG 33LEU 870
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 68 helices in PDB entry 9W51. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
33 56Right-handed alpha
Helix 2
AA2
A
60 70Right-handed alpha
Helix 3
AA3
A
72 86Right-handed alpha
Helix 4
AA4
A
89 101Right-handed alpha
Helix 5
AA5
A
107 125Right-handed alpha
Helix 6
AA6
A
130 140Right-handed alpha
Helix 7
AA7
A
141 143Right-handed 310
Helix 8
AA8
A
148 174Right-handed alpha
Helix 9
AA9
A
175 183Right-handed alpha
Helix 10
AB1
A
186 211Right-handed alpha
Helix 11
AB2
A
238 260Right-handed alpha
Helix 12
AB3
A
267 285Right-handed alpha
Helix 13
AB4
A
292 302Right-handed alpha
Helix 14
AB5
A
308 323Right-handed alpha
Helix 15
AB6
A
323 345Right-handed alpha
Helix 16
AB7
A
355 377Right-handed alpha
Helix 17
AB8
A
380 387Right-handed alpha
Helix 18
AB9
A
392 419Right-handed alpha
Helix 19
AC1
A
421 439Right-handed alpha
Helix 20
AC2
A
446 462Right-handed alpha
Helix 21
AC3
A
471 475Right-handed 310
Helix 22
AC4
A
478 500Right-handed alpha
Helix 23
AC5
A
506 510Right-handed 310
Helix 24
AC6
A
518 542Right-handed alpha
Helix 25
AC7
A
553 566Right-handed alpha
Helix 26
AC8
A
570 576Right-handed 310
Helix 27
AC9
A
612 627Right-handed alpha
Helix 28
AD1
A
641 649Right-handed alpha
Helix 29
AD2
A
672 689Right-handed alpha
Helix 30
AD3
A
701 715Right-handed alpha
Helix 31
AD4
A
729 734Right-handed alpha
Helix 32
AD5
A
776 793Right-handed alpha
Helix 33
AD6
A
835 842Right-handed alpha
Helix 34
AD7
A
861 870Right-handed alpha
Helix 35
AD8
B
34 56Right-handed alpha
Helix 36
AD9
B
60 70Right-handed alpha
Helix 37
AE1
B
72 86Right-handed alpha
Helix 38
AE2
B
89 101Right-handed alpha
Helix 39
AE3
B
107 125Right-handed alpha
Helix 40
AE4
B
130 140Right-handed alpha
Helix 41
AE5
B
141 143Right-handed 310
Helix 42
AE6
B
148 174Right-handed alpha
Helix 43
AE7
B
175 183Right-handed alpha
Helix 44
AE8
B
186 211Right-handed alpha
Helix 45
AE9
B
238 260Right-handed alpha
Helix 46
AF1
B
267 285Right-handed alpha
Helix 47
AF2
B
292 302Right-handed alpha
Helix 48
AF3
B
308 323Right-handed alpha
Helix 49
AF4
B
323 345Right-handed alpha
Helix 50
AF5
B
355 377Right-handed alpha
Helix 51
AF6
B
380 387Right-handed alpha
Helix 52
AF7
B
392 419Right-handed alpha
Helix 53
AF8
B
421 439Right-handed alpha
Helix 54
AF9
B
446 462Right-handed alpha
Helix 55
AG1
B
471 475Right-handed 310
Helix 56
AG2
B
478 500Right-handed alpha
Helix 57
AG3
B
506 510Right-handed 310
Helix 58
AG4
B
518 542Right-handed alpha
Helix 59
AG5
B
553 566Right-handed alpha
Helix 60
AG6
B
570 576Right-handed 310
Helix 61
AG7
B
612 627Right-handed alpha
Helix 62
AG8
B
641 649Right-handed alpha
Helix 63
AG9
B
672 689Right-handed alpha
Helix 64
AH1
B
701 715Right-handed alpha
Helix 65
AH2
B
729 734Right-handed alpha
Helix 66
AH3
B
776 793Right-handed alpha
Helix 67
AH4
B
835 842Right-handed alpha
Helix 68
AH5
B
861 870Right-handed alpha
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There are 4 sheets in PDB entry 9W51. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
223 226first strand
Strand 2
A
231 234anti-parallel
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There are 11 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
581 584first strand
Strand 2
A
591 597anti-parallel
Strand 3
A
600 603anti-parallel
Strand 4
A
631 637parallel
Strand 5
A
846 855anti-parallel
Strand 6
A
650 662anti-parallel
Strand 7
A
796 803anti-parallel
Strand 8
A
761 768parallel
Strand 9
A
746 754anti-parallel
Strand 10
A
737 743anti-parallel
Strand 11
A
690 694anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
223 226first strand
Strand 2
B
231 234anti-parallel
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There are 11 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
581 584first strand
Strand 2
B
591 597anti-parallel
Strand 3
B
600 603anti-parallel
Strand 4
B
631 637parallel
Strand 5
B
846 855anti-parallel
Strand 6
B
650 662anti-parallel
Strand 7
B
796 803anti-parallel
Strand 8
B
761 768parallel
Strand 9
B
746 754anti-parallel
Strand 10
B
737 743anti-parallel
Strand 11
B
690 694anti-parallel
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