Analysis of interatomic Contacts of Structural Units in PDB entry:
9W9H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9W9H entry

There are 3 chains in PDB entry 9W9H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 580THR 658
B
 ASN 574TYR 675
C
 VAL 129SER 689
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 49 helices in PDB entry 9W9H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
580 598Right-handed alpha
Helix 2
AA2
A
599 609Right-handed alpha
Helix 3
AA3
A
623 626Right-handed 310
Helix 4
AA4
A
627 635Right-handed alpha
Helix 5
AA5
A
650 654Right-handed 310
Helix 6
AA6
B
575 590Right-handed alpha
Helix 7
AA7
B
592 602Right-handed alpha
Helix 8
AA8
B
640 650Right-handed alpha
Helix 9
AA9
B
652 656Right-handed 310
Helix 10
AB1
C
139 144Right-handed 310
Helix 11
AB2
C
148 161Right-handed alpha
Helix 12
AB3
C
165 172Right-handed alpha
Helix 13
AB4
C
175 186Right-handed alpha
Helix 14
AB5
C
192 196Right-handed 310
Helix 15
AB6
C
200 206Right-handed alpha
Helix 16
AB7
C
207 209Right-handed 310
Helix 17
AB8
C
210 217Right-handed alpha
Helix 18
AB9
C
218 244Right-handed alpha
Helix 19
AC1
C
258 290Right-handed alpha
Helix 20
AC2
C
292 301Right-handed alpha
Helix 21
AC3
C
303 312Right-handed alpha
Helix 22
AC4
C
316 331Right-handed alpha
Helix 23
AC5
C
333 343Right-handed alpha
Helix 24
AC6
C
345 350Right-handed alpha
Helix 25
AC7
C
357 372Right-handed alpha
Helix 26
AC8
C
374 384Right-handed alpha
Helix 27
AC9
C
385 393Right-handed alpha
Helix 28
AD1
C
399 412Right-handed alpha
Helix 29
AD2
C
413 421Right-handed 310
Helix 30
AD3
C
426 436Right-handed alpha
Helix 31
AD4
C
442 453Right-handed alpha
Helix 32
AD5
C
455 463Right-handed alpha
Helix 33
AD6
C
467 478Right-handed alpha
Helix 34
AD7
C
480 492Right-handed alpha
Helix 35
AD8
C
495 500Right-handed alpha
Helix 36
AD9
C
501 503Right-handed 310
Helix 37
AE1
C
504 513Right-handed alpha
Helix 38
AE2
C
518 530Right-handed alpha
Helix 39
AE3
C
537 545Right-handed alpha
Helix 40
AE4
C
546 554Right-handed alpha
Helix 41
AE5
C
561 576Right-handed alpha
Helix 42
AE6
C
581 589Right-handed alpha
Helix 43
AE7
C
589 601Right-handed alpha
Helix 44
AE8
C
604 620Right-handed alpha
Helix 45
AE9
C
623 630Right-handed alpha
Helix 46
AF1
C
633 641Right-handed alpha
Helix 47
AF2
C
646 664Right-handed alpha
Helix 48
AF3
C
664 680Right-handed alpha
Helix 49
AF4
C
680 686Right-handed alpha
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There are 2 sheets in PDB entry 9W9H. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
610 613first strand
Strand 2
A
618 621anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
604 606first strand
Strand 2
B
611 613anti-parallel
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